Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is ypoP [H]
Identifier: 49186989
GI number: 49186989
Start: 3931104
End: 3931556
Strand: Reverse
Name: ypoP [H]
Synonym: BAS3991
Alternate gene names: 49186989
Gene position: 3931556-3931104 (Counterclockwise)
Preceding gene: 49186992
Following gene: 49186988
Centisome position: 75.19
GC content: 35.76
Gene sequence:
>453_bases ATGTGTAAATATGATAAAAAAGGGACGAGGCTAGTGAACGAAAAAAGAGAAACATTGATTTTAGAGTTATCCGGATCATT TCGGAAGATGATACGTTTATTACAAAATGATATTAATACACGTTTTGCAGAACATATGCCATATAATGAATTTTCTGTAT TACGCGCGTTATTTTTAAACAGTCCACAGATGGCTTCGCAAATTGCGAGTGAAGTAAACGTAACCTCCAGTCATATTACA GCTGTTACTGATCGTCTCGTACGAAAAGGGTTTGTAGAAAGAAAGCGTTCAAATTCAGACCGTCGTATCGTGTACTTAGA AATTACAGAACACGGAAGAGAAGTAACTGAAAAACTTGAAGCTGTGCGTAAAGAATATTATAAAGAGAGATTTAAAGGTT GGAGCGACCAAGAAATAGAAATGGTGTTAGAGCTATTTGGCCGCGTATTATAA
Upstream 100 bases:
>100_bases ATATGTGTGAACAAAAAAGAAATTTATATGAAAAAAGTTACATAAATGAGAATGTTGAGGGAAGAAAGCATATACAACAT AGGTATTTATAGATTATAAT
Downstream 100 bases:
>100_bases TAAATGAGGATAGGAAGCAAAAGCTTTCCTATCCTTTTTCTTTTGAATAAAAACATTTTGAAACTCCAATACTTTAATTA AAAAGAATCGGAGTGAAAAA
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MCKYDKKGTRLVNEKRETLILELSGSFRKMIRLLQNDINTRFAEHMPYNEFSVLRALFLNSPQMASQIASEVNVTSSHIT AVTDRLVRKGFVERKRSNSDRRIVYLEITEHGREVTEKLEAVRKEYYKERFKGWSDQEIEMVLELFGRVL
Sequences:
>Translated_150_residues MCKYDKKGTRLVNEKRETLILELSGSFRKMIRLLQNDINTRFAEHMPYNEFSVLRALFLNSPQMASQIASEVNVTSSHIT AVTDRLVRKGFVERKRSNSDRRIVYLEITEHGREVTEKLEAVRKEYYKERFKGWSDQEIEMVLELFGRVL >Mature_150_residues MCKYDKKGTRLVNEKRETLILELSGSFRKMIRLLQNDINTRFAEHMPYNEFSVLRALFLNSPQMASQIASEVNVTSSHIT AVTDRLVRKGFVERKRSNSDRRIVYLEITEHGREVTEKLEAVRKEYYKERFKGWSDQEIEMVLELFGRVL
Specific function: Negative Regulator Of The Multidrug Operon Emrab. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH marR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000835 - InterPro: IPR011991 [H]
Pfam domain/function: PF01047 MarR [H]
EC number: NA
Molecular weight: Translated: 17734; Mature: 17734
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCKYDKKGTRLVNEKRETLILELSGSFRKMIRLLQNDINTRFAEHMPYNEFSVLRALFLN CCCCCCCHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC SPQMASQIASEVNVTSSHITAVTDRLVRKGFVERKRSNSDRRIVYLEITEHGREVTEKLE CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHH AVRKEYYKERFKGWSDQEIEMVLELFGRVL HHHHHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MCKYDKKGTRLVNEKRETLILELSGSFRKMIRLLQNDINTRFAEHMPYNEFSVLRALFLN CCCCCCCHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC SPQMASQIASEVNVTSSHITAVTDRLVRKGFVERKRSNSDRRIVYLEITEHGREVTEKLE CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHH AVRKEYYKERFKGWSDQEIEMVLELFGRVL HHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]