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The map label for this gene is ytrC [H]

Identifier: 49186987

GI number: 49186987

Start: 3929270

End: 3930358

Strand: Direct

Name: ytrC [H]

Synonym: BAS3989

Alternate gene names: 49186987

Gene position: 3929270-3930358 (Clockwise)

Preceding gene: 49186986

Following gene: 49186990

Centisome position: 75.15

GC content: 32.87

Gene sequence:

>1089_bases
ATGTTTCATAAAGCTTTATGGATGAGGCAATGGAAGCAAGGAAAATATATAATTCTATTATTTTGGTTAACTAGTTTATA
TCAACTACCTTATAAATATTATCAAGAAGCGCAAATGCAACTAAAACTATCAAAAATGAAGTTTGGTGACTATACATATT
ACTACTCCTACTATTTTCAGACATCTGATGGTACCGTCTTCTTTCAAGGAGCTACTCTAATTGCACTCGCTTGTCTTTTA
ATTGGATGGGAACGTAATAATCAATCAAATGATTTTCTATTCTCGATGCCTTTTAAACGAAAGGATATTTTTTTAACAAA
ATGGTGGCTTGGTGTTTTCAATATTATTACAGTACAAATTGTTTGCTGGATTAGTATGTACGGAATAAAGAACATGTCGT
TTCACAATGAGTATCAAACCTTTGCTCCGTTCTATAGTTACTTTCTATATGCTACCGTTGTACTTATCGCTATTTATACA
TTCGCCTTATTTATCGGGACTATTACTGGACATATATTTTCTCAAAGTATTTTAACTATCATTCTATTATTTTTACCATA
CGGTTTTGGATTGTTAATTTCCGGATTCATTTATTCACACACACAATGGTCTGTAGATGCAATGGGAGAAATAGAGTACC
ATACTCATGAATACTTACAACATATAGGTATCATTTCACCATTAGAATATTTTTCTATTACTTATGATTACCACCCGATA
GAAACATTTGATGACTATGGCAATAAACTTCCCAGTGCATCACAGGACAATCCTACGGAGCGTATTTCTGTACCTTCTCC
TTGGACACTATTAACACCATTTTCTTACATCATTACCTTTTTATCAATAGCAACCTTTCTATACACACGTACACCGAACG
AACAAAGTGGAAAAATACTATTGTTTCCTAACTTGCAAAAATGGTTCATAATTTGCACTGTTCTATGCTTCGGACTACTT
GGTGGTAGAATATTAGGCGGACGAGATGCACTTCTGTCTTATTATGTTGGATTTTTCCTATTCGCTACCATAAGTTACTT
CATTTTTACACGTCTATTAAAATTGAAGTTTGCTTTTGCAAGGAAATAA

Upstream 100 bases:

>100_bases
ACAACACTGGAGAAGTTTTATAAAGAACAACCTATACTCATTGAAGAATTAACAATGTCACTTGAAGATATTTTTATCAC
TACATTTGAGGAGGATTCAC

Downstream 100 bases:

>100_bases
ATATGCCATGAATTATTTAACTGTTATATGAACCAAATAAAAAAAGCATTGCACAAGAGCAATGCTTTTTTTATATATCC
CGATCCAAATAAAGAGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MFHKALWMRQWKQGKYIILLFWLTSLYQLPYKYYQEAQMQLKLSKMKFGDYTYYYSYYFQTSDGTVFFQGATLIALACLL
IGWERNNQSNDFLFSMPFKRKDIFLTKWWLGVFNIITVQIVCWISMYGIKNMSFHNEYQTFAPFYSYFLYATVVLIAIYT
FALFIGTITGHIFSQSILTIILLFLPYGFGLLISGFIYSHTQWSVDAMGEIEYHTHEYLQHIGIISPLEYFSITYDYHPI
ETFDDYGNKLPSASQDNPTERISVPSPWTLLTPFSYIITFLSIATFLYTRTPNEQSGKILLFPNLQKWFIICTVLCFGLL
GGRILGGRDALLSYYVGFFLFATISYFIFTRLLKLKFAFARK

Sequences:

>Translated_362_residues
MFHKALWMRQWKQGKYIILLFWLTSLYQLPYKYYQEAQMQLKLSKMKFGDYTYYYSYYFQTSDGTVFFQGATLIALACLL
IGWERNNQSNDFLFSMPFKRKDIFLTKWWLGVFNIITVQIVCWISMYGIKNMSFHNEYQTFAPFYSYFLYATVVLIAIYT
FALFIGTITGHIFSQSILTIILLFLPYGFGLLISGFIYSHTQWSVDAMGEIEYHTHEYLQHIGIISPLEYFSITYDYHPI
ETFDDYGNKLPSASQDNPTERISVPSPWTLLTPFSYIITFLSIATFLYTRTPNEQSGKILLFPNLQKWFIICTVLCFGLL
GGRILGGRDALLSYYVGFFLFATISYFIFTRLLKLKFAFARK
>Mature_362_residues
MFHKALWMRQWKQGKYIILLFWLTSLYQLPYKYYQEAQMQLKLSKMKFGDYTYYYSYYFQTSDGTVFFQGATLIALACLL
IGWERNNQSNDFLFSMPFKRKDIFLTKWWLGVFNIITVQIVCWISMYGIKNMSFHNEYQTFAPFYSYFLYATVVLIAIYT
FALFIGTITGHIFSQSILTIILLFLPYGFGLLISGFIYSHTQWSVDAMGEIEYHTHEYLQHIGIISPLEYFSITYDYHPI
ETFDDYGNKLPSASQDNPTERISVPSPWTLLTPFSYIITFLSIATFLYTRTPNEQSGKILLFPNLQKWFIICTVLCFGLL
GGRILGGRDALLSYYVGFFLFATISYFIFTRLLKLKFAFARK

Specific function: Part of the ABC transporter complex ytrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-5 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42585; Mature: 42585

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHKALWMRQWKQGKYIILLFWLTSLYQLPYKYYQEAQMQLKLSKMKFGDYTYYYSYYFQ
CCCHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEE
TSDGTVFFQGATLIALACLLIGWERNNQSNDFLFSMPFKRKDIFLTKWWLGVFNIITVQI
CCCCEEEECCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHH
VCWISMYGIKNMSFHNEYQTFAPFYSYFLYATVVLIAIYTFALFIGTITGHIFSQSILTI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLFLPYGFGLLISGFIYSHTQWSVDAMGEIEYHTHEYLQHIGIISPLEYFSITYDYHPI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEEECCCCC
ETFDDYGNKLPSASQDNPTERISVPSPWTLLTPFSYIITFLSIATFLYTRTPNEQSGKIL
CHHHHHCCCCCCCCCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
LFPNLQKWFIICTVLCFGLLGGRILGGRDALLSYYVGFFLFATISYFIFTRLLKLKFAFA
ECCCHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RK
CC
>Mature Secondary Structure
MFHKALWMRQWKQGKYIILLFWLTSLYQLPYKYYQEAQMQLKLSKMKFGDYTYYYSYYFQ
CCCHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEE
TSDGTVFFQGATLIALACLLIGWERNNQSNDFLFSMPFKRKDIFLTKWWLGVFNIITVQI
CCCCEEEECCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHH
VCWISMYGIKNMSFHNEYQTFAPFYSYFLYATVVLIAIYTFALFIGTITGHIFSQSILTI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLFLPYGFGLLISGFIYSHTQWSVDAMGEIEYHTHEYLQHIGIISPLEYFSITYDYHPI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEEECCCCC
ETFDDYGNKLPSASQDNPTERISVPSPWTLLTPFSYIITFLSIATFLYTRTPNEQSGKIL
CHHHHHCCCCCCCCCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
LFPNLQKWFIICTVLCFGLLGGRILGGRDALLSYYVGFFLFATISYFIFTRLLKLKFAFA
ECCCHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]