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The map label for this gene is int [H]

Identifier: 49186834

GI number: 49186834

Start: 3789038

End: 3790168

Strand: Direct

Name: int [H]

Synonym: BAS3836

Alternate gene names: 49186834

Gene position: 3789038-3790168 (Clockwise)

Preceding gene: 49186831

Following gene: 49186835

Centisome position: 72.47

GC content: 36.16

Gene sequence:

>1131_bases
ATGGCATACTTTCGTAAACGTGGTGAGAAGTGGTCTTTTACTATGGATGTCGGCAAAGACCCTATCACAGGTAAACGGAA
ACAAATCACTAAAGGTGGTTTTAAAACAAAGAAAGCTGCTCAAGAAGAAGTGGCTAGGGTAACAAATGATTTAGCAAATG
GAGATTATGAGAATAGTGATATTCGCTTTTCTCAGCTCGTAGAAATCTGGACGCAAGAGAAAGAATCATCATGTAGACCA
TCAACATTGTATCAATACAAACGTATTCTACGCTCACGTGTAATGCCTGAATTCGGGGAGAAGAGGTTATCAGATATAAA
ACCTCTGAGCGTGCATAATTTTCATCAGAAGCTACTTAAAGAGGGTCTAACAACGAAATACATTTCATCCGTTGATGTTA
TGTTAAAACAAATCCTCGATAAAGGCGTAGAGTTAGAAATGATTAACTCTAATCCTGCTAAGAAAGCAAAGCGGCCAAAA
GTTAAAAAGAAAGCGCAGGCTAGTTGGACAGTTGAAGAAGCGATGAAGTTTATGGAGTATGCAAAAATACAAGGAAGCTA
TTATATTGCATTCGTTTTAGCTTTGCATACAGGTATGCGCATCGGCGAGGTATTAGCTTTACAGTGGAAGGATATTAATT
TCGAAAGCAAGGTCATTCATGTACAAAGAACATTAACGCTTGTGGATGGTAAGTATGAACTAGGTGAAACAAAAACCGAA
GCATCTAATCGAATGATTCCAATGACTCAAGAATTAATGAGAGAGCTGTTAGAATATCAAAGTCATAAAAAAGATAATTC
TTTCGACCTATTAATTTGTACAAGAAATAAAAAAATCGTGCATCCATATACGATACGCTACCAAATGAAAGCTTTGTGCG
AAGCAATTGACGTACCGTATATTAGATTCCACGATATCCGAAGAACGTTTACAACTATTTTAATCGATTCTGGTGCAAAT
GCAAAGGTTGTTTCAAAATTACTTGGTCACACAAATGTTTCTACAACTTTAAATATTTATACTGATGTTTATGAAGAACG
TCAAATTGAGGTAACTGAAATGCTAGGAAATGTACTGAAAAGTGGTCGAAGTGGTCAAAAAGTGGTCAGTGAAGAAAAAC
AAGAGGATTAA

Upstream 100 bases:

>100_bases
TTCCTTTTACAGAAATTAGGCTTACATGCTATCATTTCTTATACCACTACCACATATCACAGCTTGTATCTAGAAAACGA
CTATGACGAAGTGAAAAATC

Downstream 100 bases:

>100_bases
ACCCCGCAATATAGGTGGTATAATGCATTTATAGTGTAAGTTTTTTTTACACTATAATGAAGTCATCATAGTAAATAATA
TATAGAGTATCATGTTTTTC

Product: prophage LambdaBa02, site-specific recombinase phage integrase family protein protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MAYFRKRGEKWSFTMDVGKDPITGKRKQITKGGFKTKKAAQEEVARVTNDLANGDYENSDIRFSQLVEIWTQEKESSCRP
STLYQYKRILRSRVMPEFGEKRLSDIKPLSVHNFHQKLLKEGLTTKYISSVDVMLKQILDKGVELEMINSNPAKKAKRPK
VKKKAQASWTVEEAMKFMEYAKIQGSYYIAFVLALHTGMRIGEVLALQWKDINFESKVIHVQRTLTLVDGKYELGETKTE
ASNRMIPMTQELMRELLEYQSHKKDNSFDLLICTRNKKIVHPYTIRYQMKALCEAIDVPYIRFHDIRRTFTTILIDSGAN
AKVVSKLLGHTNVSTTLNIYTDVYEERQIEVTEMLGNVLKSGRSGQKVVSEEKQED

Sequences:

>Translated_376_residues
MAYFRKRGEKWSFTMDVGKDPITGKRKQITKGGFKTKKAAQEEVARVTNDLANGDYENSDIRFSQLVEIWTQEKESSCRP
STLYQYKRILRSRVMPEFGEKRLSDIKPLSVHNFHQKLLKEGLTTKYISSVDVMLKQILDKGVELEMINSNPAKKAKRPK
VKKKAQASWTVEEAMKFMEYAKIQGSYYIAFVLALHTGMRIGEVLALQWKDINFESKVIHVQRTLTLVDGKYELGETKTE
ASNRMIPMTQELMRELLEYQSHKKDNSFDLLICTRNKKIVHPYTIRYQMKALCEAIDVPYIRFHDIRRTFTTILIDSGAN
AKVVSKLLGHTNVSTTLNIYTDVYEERQIEVTEMLGNVLKSGRSGQKVVSEEKQED
>Mature_375_residues
AYFRKRGEKWSFTMDVGKDPITGKRKQITKGGFKTKKAAQEEVARVTNDLANGDYENSDIRFSQLVEIWTQEKESSCRPS
TLYQYKRILRSRVMPEFGEKRLSDIKPLSVHNFHQKLLKEGLTTKYISSVDVMLKQILDKGVELEMINSNPAKKAKRPKV
KKKAQASWTVEEAMKFMEYAKIQGSYYIAFVLALHTGMRIGEVLALQWKDINFESKVIHVQRTLTLVDGKYELGETKTEA
SNRMIPMTQELMRELLEYQSHKKDNSFDLLICTRNKKIVHPYTIRYQMKALCEAIDVPYIRFHDIRRTFTTILIDSGANA
KVVSKLLGHTNVSTTLNIYTDVYEERQIEVTEMLGNVLKSGRSGQKVVSEEKQED

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1787607, Length=339, Percent_Identity=23.8938053097345, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 43457; Mature: 43326

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYFRKRGEKWSFTMDVGKDPITGKRKQITKGGFKTKKAAQEEVARVTNDLANGDYENSD
CCCHHHCCCCEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
IRFSQLVEIWTQEKESSCRPSTLYQYKRILRSRVMPEFGEKRLSDIKPLSVHNFHQKLLK
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH
EGLTTKYISSVDVMLKQILDKGVELEMINSNPAKKAKRPKVKKKAQASWTVEEAMKFMEY
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCHHHHHHCCCCHHHHHHHHHH
AKIQGSYYIAFVLALHTGMRIGEVLALQWKDINFESKVIHVQRTLTLVDGKYELGETKTE
HHHCCCHHHHHHHHHHCCCHHHHEEEEEEECCCCCHHEEEEEEEEEEECCCCCCCCCHHH
ASNRMIPMTQELMRELLEYQSHKKDNSFDLLICTRNKKIVHPYTIRYQMKALCEAIDVPY
HCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECCEEHHHHHHHHHHHHCCCH
IRFHDIRRTFTTILIDSGANAKVVSKLLGHTNVSTTLNIYTDVYEERQIEVTEMLGNVLK
HHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
SGRSGQKVVSEEKQED
CCCCCHHHHHHHCCCC
>Mature Secondary Structure 
AYFRKRGEKWSFTMDVGKDPITGKRKQITKGGFKTKKAAQEEVARVTNDLANGDYENSD
CCHHHCCCCEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
IRFSQLVEIWTQEKESSCRPSTLYQYKRILRSRVMPEFGEKRLSDIKPLSVHNFHQKLLK
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH
EGLTTKYISSVDVMLKQILDKGVELEMINSNPAKKAKRPKVKKKAQASWTVEEAMKFMEY
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCHHHHHHCCCCHHHHHHHHHH
AKIQGSYYIAFVLALHTGMRIGEVLALQWKDINFESKVIHVQRTLTLVDGKYELGETKTE
HHHCCCHHHHHHHHHHCCCHHHHEEEEEEECCCCCHHEEEEEEEEEEECCCCCCCCCHHH
ASNRMIPMTQELMRELLEYQSHKKDNSFDLLICTRNKKIVHPYTIRYQMKALCEAIDVPY
HCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECCEEHHHHHHHHHHHHCCCH
IRFHDIRRTFTTILIDSGANAKVVSKLLGHTNVSTTLNIYTDVYEERQIEVTEMLGNVLK
HHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
SGRSGQKVVSEEKQED
CCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]