Click here to switch to the map view.

The map label for this gene is 49186813

Identifier: 49186813

GI number: 49186813

Start: 3776422

End: 3776670

Strand: Reverse

Name: 49186813

Synonym: BAS3815

Alternate gene names: NA

Gene position: 3776670-3776422 (Counterclockwise)

Preceding gene: 49186814

Following gene: 49186812

Centisome position: 72.23

GC content: 33.73

Gene sequence:

>249_bases
GTGAGTAACTTTAATGGAGAGAAGCTAACGGAACTTCGGCATTTATTCGGAATGACTCAAGGACAAGCTGCTGAATTGTT
GGAGGTTGATATTAATAAGTTGATTGAGATAGAGCGATCAAGAATCATTCCATCGTTTAATCAAATACAAATACTTTGCA
AGAGGTTTCACGTTAAACCAAAGTATTTTTATAGCGAATCATTTGTAACTAGTGTGGTAAATCCGAGTTATATTTCTTTT
CGATATTAA

Upstream 100 bases:

>100_bases
AACTGCTCTCCAGAAAAGCGTTTAGAAGGAAGTTCAGAACTCAAGTGCATTTATAGTATGGACGGAATATTGAGTTTTAT
TCAGGGGAGGAAGAAATGTT

Downstream 100 bases:

>100_bases
TAAGGAGGTAGAGGGGAATGAAAGAAGGAATTGGCAAATTAACTGAAATAAGTGCTTGGATGGTTTTTCTTGTAGCAACA
ATGGATGATCAGTTTGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MSNFNGEKLTELRHLFGMTQGQAAELLEVDINKLIEIERSRIIPSFNQIQILCKRFHVKPKYFYSESFVTSVVNPSYISF
RY

Sequences:

>Translated_82_residues
MSNFNGEKLTELRHLFGMTQGQAAELLEVDINKLIEIERSRIIPSFNQIQILCKRFHVKPKYFYSESFVTSVVNPSYISF
RY
>Mature_81_residues
SNFNGEKLTELRHLFGMTQGQAAELLEVDINKLIEIERSRIIPSFNQIQILCKRFHVKPKYFYSESFVTSVVNPSYISFR
Y

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9662; Mature: 9531

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFNGEKLTELRHLFGMTQGQAAELLEVDINKLIEIERSRIIPSFNQIQILCKRFHVKP
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
KYFYSESFVTSVVNPSYISFRY
CEEEHHHHHHHHCCCCEEEECC
>Mature Secondary Structure 
SNFNGEKLTELRHLFGMTQGQAAELLEVDINKLIEIERSRIIPSFNQIQILCKRFHVKP
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
KYFYSESFVTSVVNPSYISFRY
CEEEHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA