Click here to switch to the map view.

The map label for this gene is yybC [H]

Identifier: 49185247

GI number: 49185247

Start: 2240730

End: 2241215

Strand: Direct

Name: yybC [H]

Synonym: BAS2238

Alternate gene names: 49185247

Gene position: 2240730-2241215 (Clockwise)

Preceding gene: 49185244

Following gene: 49185249

Centisome position: 42.85

GC content: 32.3

Gene sequence:

>486_bases
TTGCCAACAACAAGAAAGGAAAACCTCCAATTTGGTATGATGATGTGCCTTGGGATGGTTATCGTAATGACGTTTTACAA
TTTACTAATGAATGGATCAGGAGGGCCAATTCATATTAAGGAGATTGCATTAGAACTATTAATTGGATTTATTATTGCGC
TATTAATTGAAATAAGTATTGTTGGACCTTGTGCGAAAAAAATTGTATTCATGCTACCGTTTGATAAATCAAAGAAAATA
AATATTATTATTGCCATGGCGACAGCAATGGTAATCGGAATGGTGTTCTTTATGTCATTTTTCGGAATGATTATGATGCA
TTTACATGGTGGGCTACAAGGGGACTCATTTGTTTCAATATATTTTTCAATTTTTATTAAAAATTTCATTATGGCTTATC
CGTTGCAATTAATTATTATGGGACCGCTTGTGCGTTTCTTATTTGCAAAGTTTGTTTTGAAGAATAAAGCTGTAAAAGTA
GCGTAA

Upstream 100 bases:

>100_bases
ATATGGAAACGCTTTAAAATTGTTCACAAAATGTTCACTTACGAAGGGGTTTTCAATATCGATATAATGACAAAGACTCA
AAGAGAAAGGATGATGAATT

Downstream 100 bases:

>100_bases
ATAAATTTGTATTATCTAACTATAAAAATTATATAATATTAAATGTGATCTATTGAAAGATTGTAGCATCATGCATAATG
AAGATAATCTAAATCATACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MPTTRKENLQFGMMMCLGMVIVMTFYNLLMNGSGGPIHIKEIALELLIGFIIALLIEISIVGPCAKKIVFMLPFDKSKKI
NIIIAMATAMVIGMVFFMSFFGMIMMHLHGGLQGDSFVSIYFSIFIKNFIMAYPLQLIIMGPLVRFLFAKFVLKNKAVKV
A

Sequences:

>Translated_161_residues
MPTTRKENLQFGMMMCLGMVIVMTFYNLLMNGSGGPIHIKEIALELLIGFIIALLIEISIVGPCAKKIVFMLPFDKSKKI
NIIIAMATAMVIGMVFFMSFFGMIMMHLHGGLQGDSFVSIYFSIFIKNFIMAYPLQLIIMGPLVRFLFAKFVLKNKAVKV
A
>Mature_160_residues
PTTRKENLQFGMMMCLGMVIVMTFYNLLMNGSGGPIHIKEIALELLIGFIIALLIEISIVGPCAKKIVFMLPFDKSKKIN
IIIAMATAMVIGMVFFMSFFGMIMMHLHGGLQGDSFVSIYFSIFIKNFIMAYPLQLIIMGPLVRFLFAKFVLKNKAVKVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18043; Mature: 17912

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
10.6 %Met     (Translated Protein)
11.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
10.0 %Met     (Mature Protein)
11.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTRKENLQFGMMMCLGMVIVMTFYNLLMNGSGGPIHIKEIALELLIGFIIALLIEISI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VGPCAKKIVFMLPFDKSKKINIIIAMATAMVIGMVFFMSFFGMIMMHLHGGLQGDSFVSI
CCHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
YFSIFIKNFIMAYPLQLIIMGPLVRFLFAKFVLKNKAVKVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PTTRKENLQFGMMMCLGMVIVMTFYNLLMNGSGGPIHIKEIALELLIGFIIALLIEISI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VGPCAKKIVFMLPFDKSKKINIIIAMATAMVIGMVFFMSFFGMIMMHLHGGLQGDSFVSI
CCHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
YFSIFIKNFIMAYPLQLIIMGPLVRFLFAKFVLKNKAVKVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]