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The map label for this gene is (hspc4-1 [H]

Identifier: 49185105

GI number: 49185105

Start: 2098826

End: 2099287

Strand: Reverse

Name: (hspc4-1 [H]

Synonym: BAS2094

Alternate gene names: 49185105

Gene position: 2099287-2098826 (Counterclockwise)

Preceding gene: 49185116

Following gene: 49185103

Centisome position: 40.15

GC content: 34.42

Gene sequence:

>462_bases
ATGAGTGAAGAAAAAAAAGACTCTTCTCGCCCACCGGTTCGTAATTATTTAAAGCAAATTGATGATTTCTTCGAGCAAAC
ACCACTTCGTAATGTAATCGCTGATTTAAATCATTTTTTCCAAAAAGGAAACCGTTTATTAACATTCCCTGTAGATTTAT
ATGAAGTTGGTGAAGAACTCGTTGTGACAGCTGAACTACCAGGTATACAAAAAGAACAAATTCAAATTGAAATACAAAGT
GAATACTTAAAAGTCTCTGTAAAAGAAGAGATACTTGAAGAAGAAGAGCAAACATCCCATAACTATTATCGCCGAGAACG
TTCTATTTCAGAAGCATCCAGATTAATTAAATTACCGTACTCCATTAATAAAAAAGCAGCAAAAGCTTCGTATCAAAATG
GCGTGTTAGAAATTCGGGCGCCAAAACTTCCACAGCAACATGACATTTTATCCATAGACTAA

Upstream 100 bases:

>100_bases
ACATTTTTAACAATTTTTTATGAAAACATGAAAACTAGGCACTCACCTTTCTCCGCTTTTGTCATATGATATTGCAAATT
GATTTTTAGGAGGGAATATT

Downstream 100 bases:

>100_bases
TGTAAAAAAAGAAGGGTGCTTTATAATCTGCACCCTTCTTTTTATTCTGCTAATCGCTTCATATCACGTATAATGTCCTC
ATACGGCGTATTACTAATGC

Product: HSP20 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSEEKKDSSRPPVRNYLKQIDDFFEQTPLRNVIADLNHFFQKGNRLLTFPVDLYEVGEELVVTAELPGIQKEQIQIEIQS
EYLKVSVKEEILEEEEQTSHNYYRRERSISEASRLIKLPYSINKKAAKASYQNGVLEIRAPKLPQQHDILSID

Sequences:

>Translated_153_residues
MSEEKKDSSRPPVRNYLKQIDDFFEQTPLRNVIADLNHFFQKGNRLLTFPVDLYEVGEELVVTAELPGIQKEQIQIEIQS
EYLKVSVKEEILEEEEQTSHNYYRRERSISEASRLIKLPYSINKKAAKASYQNGVLEIRAPKLPQQHDILSID
>Mature_152_residues
SEEKKDSSRPPVRNYLKQIDDFFEQTPLRNVIADLNHFFQKGNRLLTFPVDLYEVGEELVVTAELPGIQKEQIQIEIQSE
YLKVSVKEEILEEEEQTSHNYYRRERSISEASRLIKLPYSINKKAAKASYQNGVLEIRAPKLPQQHDILSID

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17862; Mature: 17731

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEKKDSSRPPVRNYLKQIDDFFEQTPLRNVIADLNHFFQKGNRLLTFPVDLYEVGEEL
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECHHHHHCCCCE
VVTAELPGIQKEQIQIEIQSEYLKVSVKEEILEEEEQTSHNYYRRERSISEASRLIKLPY
EEEECCCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
SINKKAAKASYQNGVLEIRAPKLPQQHDILSID
CCCHHHHHHHHHCCEEEEECCCCCCCCCCEECC
>Mature Secondary Structure 
SEEKKDSSRPPVRNYLKQIDDFFEQTPLRNVIADLNHFFQKGNRLLTFPVDLYEVGEEL
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECHHHHHCCCCE
VVTAELPGIQKEQIQIEIQSEYLKVSVKEEILEEEEQTSHNYYRRERSISEASRLIKLPY
EEEECCCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
SINKKAAKASYQNGVLEIRAPKLPQQHDILSID
CCCHHHHHHHHHCCEEEEECCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA