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The map label for this gene is 49185058

Identifier: 49185058

GI number: 49185058

Start: 2057435

End: 2057899

Strand: Direct

Name: 49185058

Synonym: BAS2047

Alternate gene names: NA

Gene position: 2057435-2057899 (Clockwise)

Preceding gene: 49185057

Following gene: 49185059

Centisome position: 39.35

GC content: 37.85

Gene sequence:

>465_bases
ATGAAATACATCGAAAGAGAATTAAAACAGCTAGTAAATCTACTAGATTATCAATTAGAGACGATGCCGGGAATAGAACT
TGTGACGGCATCAGCATTAATTGCAGAAATTGGAGATGTAAGACGATTTCCAAATGCCAACAAATTAGCACGATTTGCGG
GGATTGCGCCTGTTTACTTTGGTTCTGGTGGGAAAGGTAAGACACACAAAAGCAAACAAGGAAACAGGGCGCTACACGCT
TTATTTTATAATTTAGCAGTGCAGCAAGTGCAAGTAGCAAAAGGCAGTAAGATGCCACGAAACCCAGTGTTTCATGCGTA
CTATCAAAAGAAGCTTAAAGAAGGTAAAACAAAAGGACAAGCACTTGTGTGTATTATGAGAAGGCTTGTAAACATTGTAT
ATGGCATGATGAAATATAAAACGGCATATGAATTGCCGATAGTAGAAGAAAAAGAAGTAGTTTAA

Upstream 100 bases:

>100_bases
AACTTGTAAAAGAAGATGGACAAACAATGAAAGAGTATCAAGAAATGCGAAACTTTTTAGTAAGAAGTATTGTACGGGAG
ATTGAGTTTAAAAGAAGGAA

Downstream 100 bases:

>100_bases
TAAGGTTTACATGGTTTGCTTTTTTATTGTGAGGGTTTAAGATTACAACATAGGGTACGGGTGATATTGGAACACCGCCT
CGATACGGGGAAAGAAGAAT

Product: IS110 family transposase OrfB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKYIERELKQLVNLLDYQLETMPGIELVTASALIAEIGDVRRFPNANKLARFAGIAPVYFGSGGKGKTHKSKQGNRALHA
LFYNLAVQQVQVAKGSKMPRNPVFHAYYQKKLKEGKTKGQALVCIMRRLVNIVYGMMKYKTAYELPIVEEKEVV

Sequences:

>Translated_154_residues
MKYIERELKQLVNLLDYQLETMPGIELVTASALIAEIGDVRRFPNANKLARFAGIAPVYFGSGGKGKTHKSKQGNRALHA
LFYNLAVQQVQVAKGSKMPRNPVFHAYYQKKLKEGKTKGQALVCIMRRLVNIVYGMMKYKTAYELPIVEEKEVV
>Mature_154_residues
MKYIERELKQLVNLLDYQLETMPGIELVTASALIAEIGDVRRFPNANKLARFAGIAPVYFGSGGKGKTHKSKQGNRALHA
LFYNLAVQQVQVAKGSKMPRNPVFHAYYQKKLKEGKTKGQALVCIMRRLVNIVYGMMKYKTAYELPIVEEKEVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 17405; Mature: 17405

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYIERELKQLVNLLDYQLETMPGIELVTASALIAEIGDVRRFPNANKLARFAGIAPVYF
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEE
GSGGKGKTHKSKQGNRALHALFYNLAVQQVQVAKGSKMPRNPVFHAYYQKKLKEGKTKGQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHH
ALVCIMRRLVNIVYGMMKYKTAYELPIVEEKEVV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKYIERELKQLVNLLDYQLETMPGIELVTASALIAEIGDVRRFPNANKLARFAGIAPVYF
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEE
GSGGKGKTHKSKQGNRALHALFYNLAVQQVQVAKGSKMPRNPVFHAYYQKKLKEGKTKGQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHH
ALVCIMRRLVNIVYGMMKYKTAYELPIVEEKEVV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1700062 [H]