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The map label for this gene is cisA [H]

Identifier: 49185056

GI number: 49185056

Start: 2055724

End: 2056506

Strand: Direct

Name: cisA [H]

Synonym: BAS2045

Alternate gene names: 49185056

Gene position: 2055724-2056506 (Clockwise)

Preceding gene: 49185055

Following gene: 49185057

Centisome position: 39.32

GC content: 37.68

Gene sequence:

>783_bases
ATGGAAGAAAAAGTAGTTGGTTATGTACGAGTTTCAACAGAAGGACAAGTACGTGAAGGGTATAGCCTAACGTATCAAGT
AGAAGAAATTGAACGGCACTGCATTGAAAATAAACTACAGCTGCTTCACATATACGAAGATAAAGGAATTAGCGGAGCGA
CAGTAGATGAAGATGGATTAACAGTTGAACGTGAAGGCTTACAAGAATTACTGTCAGATATGACGTGTCATCAAGTAAGC
AAAGTTATTGTACTAAATACATCTCGGTTATGGCGCTCTGATATGGCAAAAGTGTTAATACAACGAGAGCTAAAGAAACA
TGCAGTTGATGTGAAAGCAATTGAACAACCGAATTATAGTATATACACACATGACCCAAATGATTTTTTAGTAAATGGTA
TGTTAGAGCTATTAGACCAATACCAACGTCTTGAGATTGTATTAAAGCTAAGTCGAGGTAGAAAGAAAAAAGCGGAACAA
GGTGGATATGCTGGGGGCGGTGTGATGTTTGGTTATAGAGTAAAGAAAGGACAAAAAGTGTTAGAAGTGGATACTAATAA
AGCAATCGTTGTACGTAGACTATTTGAGCTACGACACTTTTGTAAGCATTGGTCACTTACTCAATTGGCAGAAAGACTGA
ATAGGGAAGGCTATTGTACAGAGAAAGGGAAGCGGTTTACGAAAGTACAAGTGAAACGCATGTTAGACCGAGAGAACTTT
TATCGAGGGGTATATACATACGGGCAAATACAAACAAATGGGAAACATCCAGCAATTATATAA

Upstream 100 bases:

>100_bases
TAAAGTACATTTTAACGGATGGACGTTATGCACACGTTATCCGCAAAAAACGGGTAAACGTTACAGGGACTTTAATTGCT
GTAACGGGAAGGGACTTAAT

Downstream 100 bases:

>100_bases
CAGTCTTACTTAAAAAAATCGCTCATTTTACTATATGTACTTATGAAATTATGAAAATGGATAGGCTTGCGTACCTATGC
GCATCGAAAGATGAACGCTC

Product: resolvase family site-specific recombinase

Products: NA

Alternate protein names: Stage IV sporulation protein CA [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MEEKVVGYVRVSTEGQVREGYSLTYQVEEIERHCIENKLQLLHIYEDKGISGATVDEDGLTVEREGLQELLSDMTCHQVS
KVIVLNTSRLWRSDMAKVLIQRELKKHAVDVKAIEQPNYSIYTHDPNDFLVNGMLELLDQYQRLEIVLKLSRGRKKKAEQ
GGYAGGGVMFGYRVKKGQKVLEVDTNKAIVVRRLFELRHFCKHWSLTQLAERLNREGYCTEKGKRFTKVQVKRMLDRENF
YRGVYTYGQIQTNGKHPAII

Sequences:

>Translated_260_residues
MEEKVVGYVRVSTEGQVREGYSLTYQVEEIERHCIENKLQLLHIYEDKGISGATVDEDGLTVEREGLQELLSDMTCHQVS
KVIVLNTSRLWRSDMAKVLIQRELKKHAVDVKAIEQPNYSIYTHDPNDFLVNGMLELLDQYQRLEIVLKLSRGRKKKAEQ
GGYAGGGVMFGYRVKKGQKVLEVDTNKAIVVRRLFELRHFCKHWSLTQLAERLNREGYCTEKGKRFTKVQVKRMLDRENF
YRGVYTYGQIQTNGKHPAII
>Mature_260_residues
MEEKVVGYVRVSTEGQVREGYSLTYQVEEIERHCIENKLQLLHIYEDKGISGATVDEDGLTVEREGLQELLSDMTCHQVS
KVIVLNTSRLWRSDMAKVLIQRELKKHAVDVKAIEQPNYSIYTHDPNDFLVNGMLELLDQYQRLEIVLKLSRGRKKKAEQ
GGYAGGGVMFGYRVKKGQKVLEVDTNKAIVVRRLFELRHFCKHWSLTQLAERLNREGYCTEKGKRFTKVQVKRMLDRENF
YRGVYTYGQIQTNGKHPAII

Specific function: Putative site-specific recombinase having a very important role in sporulation. It probably plays a role in the recombination of spoIIIC and spoIVCB to form sigma K factor [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011109
- InterPro:   IPR006118
- InterPro:   IPR006119 [H]

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 30155; Mature: 30155

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKVVGYVRVSTEGQVREGYSLTYQVEEIERHCIENKLQLLHIYEDKGISGATVDEDGL
CCCCEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHEEEEEECCCCCCCCEECCCCC
TVEREGLQELLSDMTCHQVSKVIVLNTSRLWRSDMAKVLIQRELKKHAVDVKAIEQPNYS
EECHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCE
IYTHDPNDFLVNGMLELLDQYQRLEIVLKLSRGRKKKAEQGGYAGGGVMFGYRVKKGQKV
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEECCCCEE
LEVDTNKAIVVRRLFELRHFCKHWSLTQLAERLNREGYCTEKGKRFTKVQVKRMLDRENF
EEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
YRGVYTYGQIQTNGKHPAII
HHHHEEEEEEEECCCCCCCC
>Mature Secondary Structure
MEEKVVGYVRVSTEGQVREGYSLTYQVEEIERHCIENKLQLLHIYEDKGISGATVDEDGL
CCCCEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHEEEEEECCCCCCCCEECCCCC
TVEREGLQELLSDMTCHQVSKVIVLNTSRLWRSDMAKVLIQRELKKHAVDVKAIEQPNYS
EECHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCE
IYTHDPNDFLVNGMLELLDQYQRLEIVLKLSRGRKKKAEQGGYAGGGVMFGYRVKKGQKV
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEECCCCEE
LEVDTNKAIVVRRLFELRHFCKHWSLTQLAERLNREGYCTEKGKRFTKVQVKRMLDRENF
EEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
YRGVYTYGQIQTNGKHPAII
HHHHEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2105293; 7704261; 8969508; 9384377 [H]