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The map label for this gene is 49184978

Identifier: 49184978

GI number: 49184978

Start: 1972294

End: 1972974

Strand: Direct

Name: 49184978

Synonym: BAS1967

Alternate gene names: NA

Gene position: 1972294-1972974 (Clockwise)

Preceding gene: 49184977

Following gene: 49184982

Centisome position: 37.72

GC content: 36.71

Gene sequence:

>681_bases
ATGAGTTTAGATTGTAGAGTTAGAGAATCTATACAAGAAGAAGCGAAGGGGATTGTTGCCCCGCCGGAGTTGAAAGAAAA
AGTAATCGTTCAAATAAAAATGAATCAAGGAGGGCGTAAGAGGAAGAAACGCCTTATCGCAGGAGTACTTGCGGCGGCTT
TTTTAATCCCGACGACTGGTTTTGCGTATCAATCTATTATGGCAGATGGTATATACGGATCTTTTGAGAATTTAAAAAAG
CATGCTGGAACGATGACATTAGAGGCGTACATGCGTTTTAGTGCAAAGTTATCAGAAGCGAAAGATGAAATGGGTACGAA
AGAATATGAAGTGTTTACAAAAGAACTAAAGAAATTAACGAATGCAAAGCTTGCGTACGGAGATTCGAACGGTAATATTG
ATTATGATGCATTATCATCAGAAAAAAGAGAAGAAATGAAAAAGGTAAGTATGGGCCTTCAACCATACTTTGATAAATTA
AATGGTCATAAATCAAGTAAAGAAGTATTAACGCAAGAAGAGTTTGATCGCTATATGGAAGCTTTAATGACACATGAAAT
CGTACGAGTGAAGACAAAATCAACTGGTGCAATAAAAGTAGAAGAAATACCTGAGGCGTACAAAGAAAGGTTTATTAAAG
CGGAGCAGTTTATGGAGTATGTAGACGAAAAGGTAAGATAA

Upstream 100 bases:

>100_bases
CAATTGGTACTGTGAAATCTAGAATTCACGCAGCATTAAAAAAACTACGTCAAAAAGAGCAAATAGAAGAAATCTTTTTA
GGAGAGGTAGGGAATGTGAA

Downstream 100 bases:

>100_bases
GTTAGAAAGCTCATAGCTTTTGCTTTGAGCTTTTTTATTGAAACAAAAAAAGAGTGCTCAATTATATTTTTTCATATTTA
CAGTATCTTTTTGTATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Ecf-Type Sigma Factor Negative Effector

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSLDCRVRESIQEEAKGIVAPPELKEKVIVQIKMNQGGRKRKKRLIAGVLAAAFLIPTTGFAYQSIMADGIYGSFENLKK
HAGTMTLEAYMRFSAKLSEAKDEMGTKEYEVFTKELKKLTNAKLAYGDSNGNIDYDALSSEKREEMKKVSMGLQPYFDKL
NGHKSSKEVLTQEEFDRYMEALMTHEIVRVKTKSTGAIKVEEIPEAYKERFIKAEQFMEYVDEKVR

Sequences:

>Translated_226_residues
MSLDCRVRESIQEEAKGIVAPPELKEKVIVQIKMNQGGRKRKKRLIAGVLAAAFLIPTTGFAYQSIMADGIYGSFENLKK
HAGTMTLEAYMRFSAKLSEAKDEMGTKEYEVFTKELKKLTNAKLAYGDSNGNIDYDALSSEKREEMKKVSMGLQPYFDKL
NGHKSSKEVLTQEEFDRYMEALMTHEIVRVKTKSTGAIKVEEIPEAYKERFIKAEQFMEYVDEKVR
>Mature_225_residues
SLDCRVRESIQEEAKGIVAPPELKEKVIVQIKMNQGGRKRKKRLIAGVLAAAFLIPTTGFAYQSIMADGIYGSFENLKKH
AGTMTLEAYMRFSAKLSEAKDEMGTKEYEVFTKELKKLTNAKLAYGDSNGNIDYDALSSEKREEMKKVSMGLQPYFDKLN
GHKSSKEVLTQEEFDRYMEALMTHEIVRVKTKSTGAIKVEEIPEAYKERFIKAEQFMEYVDEKVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25792; Mature: 25661

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDCRVRESIQEEAKGIVAPPELKEKVIVQIKMNQGGRKRKKRLIAGVLAAAFLIPTTG
CCCCHHHHHHHHHHHCCCCCCHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
FAYQSIMADGIYGSFENLKKHAGTMTLEAYMRFSAKLSEAKDEMGTKEYEVFTKELKKLT
HHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
NAKLAYGDSNGNIDYDALSSEKREEMKKVSMGLQPYFDKLNGHKSSKEVLTQEEFDRYME
CCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
ALMTHEIVRVKTKSTGAIKVEEIPEAYKERFIKAEQFMEYVDEKVR
HHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLDCRVRESIQEEAKGIVAPPELKEKVIVQIKMNQGGRKRKKRLIAGVLAAAFLIPTTG
CCCHHHHHHHHHHHCCCCCCHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCC
FAYQSIMADGIYGSFENLKKHAGTMTLEAYMRFSAKLSEAKDEMGTKEYEVFTKELKKLT
HHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
NAKLAYGDSNGNIDYDALSSEKREEMKKVSMGLQPYFDKLNGHKSSKEVLTQEEFDRYME
CCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
ALMTHEIVRVKTKSTGAIKVEEIPEAYKERFIKAEQFMEYVDEKVR
HHHHHHHHHEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA