Click here to switch to the map view.

The map label for this gene is ytfJ [H]

Identifier: 49184964

GI number: 49184964

Start: 1961933

End: 1962358

Strand: Direct

Name: ytfJ [H]

Synonym: BAS1953

Alternate gene names: 49184964

Gene position: 1961933-1962358 (Clockwise)

Preceding gene: 49184961

Following gene: 49184965

Centisome position: 37.52

GC content: 39.44

Gene sequence:

>426_bases
GTGGATCATCCAATTCAAGGGTTAATGAAAGCAGCAATGGAAAATTTAAAAGAAATGGTCGATGTAAATACGATTGTTGG
AGAGCCTGTTCAGACGGCTGACGGTGGTGTAGTGTTAACGGTTTCTAAAGTAGCGTTCGGTTTTGGAGCAGGAGGTTCTG
ATTTCCAAACGAATGATGGACAAAGAGCGAACGGTAACCCTGCATTTGGTGGCGGTAGCGCGGGTGGTGTTTCTATTACA
CCAGTAGCATTTCTTGTGGTGAATAAAGATGGAGTAAATATTCTGCATCTACAAAATGCGACACATTTAGCGGAAAAAAT
GATTGAATTAGCTCCACAAACAATTGATAAAATTCAATCGATGTTCCAAAAAGATGAAAAAAAAGAGGGAAATCATCATC
CTCAAAATCCAGATGAAATCCTTTAA

Upstream 100 bases:

>100_bases
TTTACAACTTAAGTTTTTTGAAAGCAATATAAAAATTTTATGTTTAGTTCACAAACTTTCGGAAAAACTAGGAAAGATAT
GACAAAGGAGGTTATGAACG

Downstream 100 bases:

>100_bases
AAACGCCTGCTCACGAGCAGGTGTTTTTTCTTGTAATCACTATGTAATAAAACACATGAAATTGTAAATAGTTTTTGAAG
TTTTTTCTATGTTTCTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MDHPIQGLMKAAMENLKEMVDVNTIVGEPVQTADGGVVLTVSKVAFGFGAGGSDFQTNDGQRANGNPAFGGGSAGGVSIT
PVAFLVVNKDGVNILHLQNATHLAEKMIELAPQTIDKIQSMFQKDEKKEGNHHPQNPDEIL

Sequences:

>Translated_141_residues
MDHPIQGLMKAAMENLKEMVDVNTIVGEPVQTADGGVVLTVSKVAFGFGAGGSDFQTNDGQRANGNPAFGGGSAGGVSIT
PVAFLVVNKDGVNILHLQNATHLAEKMIELAPQTIDKIQSMFQKDEKKEGNHHPQNPDEIL
>Mature_141_residues
MDHPIQGLMKAAMENLKEMVDVNTIVGEPVQTADGGVVLTVSKVAFGFGAGGSDFQTNDGQRANGNPAFGGGSAGGVSIT
PVAFLVVNKDGVNILHLQNATHLAEKMIELAPQTIDKIQSMFQKDEKKEGNHHPQNPDEIL

Specific function: Unknown

COG id: COG3874

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Spore core (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014229 [H]

Pfam domain/function: PF09579 Spore_YtfJ [H]

EC number: NA

Molecular weight: Translated: 14905; Mature: 14905

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHPIQGLMKAAMENLKEMVDVNTIVGEPVQTADGGVVLTVSKVAFGFGAGGSDFQTNDG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCCCC
QRANGNPAFGGGSAGGVSITPVAFLVVNKDGVNILHLQNATHLAEKMIELAPQTIDKIQS
CCCCCCCCCCCCCCCCEEECCEEEEEECCCCCEEEEECCHHHHHHHHHHHCHHHHHHHHH
MFQKDEKKEGNHHPQNPDEIL
HHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDHPIQGLMKAAMENLKEMVDVNTIVGEPVQTADGGVVLTVSKVAFGFGAGGSDFQTNDG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCCCC
QRANGNPAFGGGSAGGVSITPVAFLVVNKDGVNILHLQNATHLAEKMIELAPQTIDKIQS
CCCCCCCCCCCCCCCCEEECCEEEEEECCCCCEEEEECCHHHHHHHHHHHCHHHHHHHHH
MFQKDEKKEGNHHPQNPDEIL
HHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]