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The map label for this gene is ycgR [H]

Identifier: 49184916

GI number: 49184916

Start: 1924309

End: 1925205

Strand: Direct

Name: ycgR [H]

Synonym: BAS1904

Alternate gene names: 49184916

Gene position: 1924309-1925205 (Clockwise)

Preceding gene: 49184915

Following gene: 49184917

Centisome position: 36.8

GC content: 37.35

Gene sequence:

>897_bases
ATGGAATTGTTTCAATTACCGAAAGCATTCCTGCAAATGAATACAATCTTTATCTCCATATTGATCGAAGCACTTCCTTT
TGTGCTCATTGGTGTATTTATTTCAGGATTCATTCAAATGTTTGTGACAGAAGATATGGTAGCAAAATGGATGCCGAAAA
ACCGTTTTCTGTCTGTTTTAATGGCTACTTTTTTAGGTATGATGTTTCCGGGCTGTGAATGTGGAATCGTTCCGATTGTT
AGGCGATTAATCGGAAAAGGGGTTCCGCCATATGCCGGGATTGCATTTATGTTAACTGGTCCAATTATTAATCCGGTCGT
ATTATTTGCAACATACGTTGCTTTTGGAAGTAGTATGCACATGGTATGGTATCGTTCGATTGTAGCGATTATCGTAGCAA
TCATCGTTGGAATTATCTTATCATTTATGTTTAAAGAACATCAATTACGAGATGATCACTTCCCAGAAGTGAATCATAAG
CGTCCATTACGTAAAAAAATGTGGGATGTATGTACGCATGCTGTTGAGGAATTTTTCTCGATGGGGAAATATTTAGTATT
AGGAGCGTTAATTGCAGCTGCAGTTCAAACATTCGTACAAACTTCAACACTTCTTGCTATAGGACAAGGGCCGTTCTCTT
CACCAGCTGTTATGATGGGACTTGCATATATATTATCACTTTGTTCAGAAGCAGATGCGTTTATTGCTTCATCATTCCAA
AGTACATTTTCAACAGCATCACTTGTTGCGTTCCTTGTATATGGACCGATGGTGGATATTAAAAATATGTTTATGATGCT
TGCGACATTTAAAACAAAATTTGTAATTGTCGTTACAGTTACAGTTACACTTGTTGTTTATGCAAGCTCACTACTCATTT
ATGCGATGGGGTGGTAG

Upstream 100 bases:

>100_bases
TCATGTATATGAAAGGTGTGAATTCCGTATAAGTCTTGTCCAATTAATAAAATGGGGTTAAAATTACATATTGTTAATGA
AAAGTTGGAGGAAATACATC

Downstream 100 bases:

>100_bases
GTTATGTTTCGAGCATATATATTATTAGGTTTTACAATCTTAATCGCGCAGCTTCATATTTCAGGTAATATTACGAAGTA
TATCAATATGAAGTATGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MELFQLPKAFLQMNTIFISILIEALPFVLIGVFISGFIQMFVTEDMVAKWMPKNRFLSVLMATFLGMMFPGCECGIVPIV
RRLIGKGVPPYAGIAFMLTGPIINPVVLFATYVAFGSSMHMVWYRSIVAIIVAIIVGIILSFMFKEHQLRDDHFPEVNHK
RPLRKKMWDVCTHAVEEFFSMGKYLVLGALIAAAVQTFVQTSTLLAIGQGPFSSPAVMMGLAYILSLCSEADAFIASSFQ
STFSTASLVAFLVYGPMVDIKNMFMMLATFKTKFVIVVTVTVTLVVYASSLLIYAMGW

Sequences:

>Translated_298_residues
MELFQLPKAFLQMNTIFISILIEALPFVLIGVFISGFIQMFVTEDMVAKWMPKNRFLSVLMATFLGMMFPGCECGIVPIV
RRLIGKGVPPYAGIAFMLTGPIINPVVLFATYVAFGSSMHMVWYRSIVAIIVAIIVGIILSFMFKEHQLRDDHFPEVNHK
RPLRKKMWDVCTHAVEEFFSMGKYLVLGALIAAAVQTFVQTSTLLAIGQGPFSSPAVMMGLAYILSLCSEADAFIASSFQ
STFSTASLVAFLVYGPMVDIKNMFMMLATFKTKFVIVVTVTVTLVVYASSLLIYAMGW
>Mature_298_residues
MELFQLPKAFLQMNTIFISILIEALPFVLIGVFISGFIQMFVTEDMVAKWMPKNRFLSVLMATFLGMMFPGCECGIVPIV
RRLIGKGVPPYAGIAFMLTGPIINPVVLFATYVAFGSSMHMVWYRSIVAIIVAIIVGIILSFMFKEHQLRDDHFPEVNHK
RPLRKKMWDVCTHAVEEFFSMGKYLVLGALIAAAVQTFVQTSTLLAIGQGPFSSPAVMMGLAYILSLCSEADAFIASSFQ
STFSTASLVAFLVYGPMVDIKNMFMMLATFKTKFVIVVTVTVTLVVYASSLLIYAMGW

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 33078; Mature: 33078

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELFQLPKAFLQMNTIFISILIEALPFVLIGVFISGFIQMFVTEDMVAKWMPKNRFLSVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MATFLGMMFPGCECGIVPIVRRLIGKGVPPYAGIAFMLTGPIINPVVLFATYVAFGSSMH
HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
MVWYRSIVAIIVAIIVGIILSFMFKEHQLRDDHFPEVNHKRPLRKKMWDVCTHAVEEFFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MGKYLVLGALIAAAVQTFVQTSTLLAIGQGPFSSPAVMMGLAYILSLCSEADAFIASSFQ
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
STFSTASLVAFLVYGPMVDIKNMFMMLATFKTKFVIVVTVTVTLVVYASSLLIYAMGW
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELFQLPKAFLQMNTIFISILIEALPFVLIGVFISGFIQMFVTEDMVAKWMPKNRFLSVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MATFLGMMFPGCECGIVPIVRRLIGKGVPPYAGIAFMLTGPIINPVVLFATYVAFGSSMH
HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
MVWYRSIVAIIVAIIVGIILSFMFKEHQLRDDHFPEVNHKRPLRKKMWDVCTHAVEEFFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MGKYLVLGALIAAAVQTFVQTSTLLAIGQGPFSSPAVMMGLAYILSLCSEADAFIASSFQ
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
STFSTASLVAFLVYGPMVDIKNMFMMLATFKTKFVIVVTVTVTLVVYASSLLIYAMGW
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]