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The map label for this gene is ymfD [H]

Identifier: 49184859

GI number: 49184859

Start: 1873096

End: 1873662

Strand: Direct

Name: ymfD [H]

Synonym: BAS1847

Alternate gene names: 49184859

Gene position: 1873096-1873662 (Clockwise)

Preceding gene: 49184858

Following gene: 49184861

Centisome position: 35.82

GC content: 35.27

Gene sequence:

>567_bases
ATGGTTGGTGCAATTATTATGCTTATTTTATTCGGAATTCTCTTTTATTTGTCAACTATATTGGAATCAAAGTATGACAT
TCATGGTATATGGAAAGGGTGTGTACTTGCGATTCCGTTACTTGTACTGTCACTTAGTTCATATATGGCTGGTAAAAAAA
TTGGAGATAATCAAAATGTGATGAAGAAGTGTATTTATATTGGTTTTTTAATGGCTGCTGCATCAGTTATCATTCCTTTA
TTTATAAAAGGGATTTATTTACTACTTCTTTGTCTCGTTATTATGGGGATAGGAATTGGTATGGCACTCCCATGTTTAGA
TGCTCTCATTACACAAGGGATTGAAAAGGAGCAAAGGGGAACGGTTACGTCATTTTATAGTTCTATGCGATTTATCGGTG
TAGCAGCTGGACCGCCTCTATACTCTTTTTTCATGAAAGGTACTGACCATGAAGTGTTTTATTTAACAAGTATTTTCGCT
GCTATCGGTGCTGTTATAGCGATCATTTGGATTAAACCAGCAAAAGATGCAAAGAACGTAAAACAGAAACCGGAACCTAC
TTCATAA

Upstream 100 bases:

>100_bases
TATTACTTGTTCTAGTAAAGGCAAAGAAACAAGAAGGAGAAGTACCGCCACTTAAAGAGTTTATCAAATCTATTGTCGCT
ACGTTTCGAGAAAAGGGAAG

Downstream 100 bases:

>100_bases
TTTGAAAGAGAATTGCATGATGTTTTCAGTAACATGCAATTCTCTTTCGTTCACTAAGAATAAATAACTTGTTTTAACAT
ATAAAGTGCGACACCCCATA

Product: transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MVGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAAASVIIPL
FIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLTSIFA
AIGAVIAIIWIKPAKDAKNVKQKPEPTS

Sequences:

>Translated_188_residues
MVGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAAASVIIPL
FIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLTSIFA
AIGAVIAIIWIKPAKDAKNVKQKPEPTS
>Mature_188_residues
MVGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAAASVIIPL
FIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLTSIFA
AIGAVIAIIWIKPAKDAKNVKQKPEPTS

Specific function: Involved in secretion of bacillibactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001958 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 20490; Mature: 20490

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNV
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
MKKCIYIGFLMAAASVIIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEKEQRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
TVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLTSIFAAIGAVIAIIWIKPAKDAKNV
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KQKPEPTS
CCCCCCCC
>Mature Secondary Structure
MVGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNV
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
MKKCIYIGFLMAAASVIIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEKEQRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
TVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLTSIFAAIGAVIAIIWIKPAKDAKNV
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KQKPEPTS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]