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The map label for this gene is uidR [C]

Identifier: 49184800

GI number: 49184800

Start: 1814530

End: 1815117

Strand: Direct

Name: uidR [C]

Synonym: BAS1788

Alternate gene names: 49184800

Gene position: 1814530-1815117 (Clockwise)

Preceding gene: 49184798

Following gene: 49184801

Centisome position: 34.7

GC content: 35.71

Gene sequence:

>588_bases
ATGGATGTAAAAAACCTAACAACAAAAGGGTTAGAAACGAGAGAGAAATTATTGTGTGCTGCAGAAGAGGTGTTTGGTAG
TAAAGGGTATTACGAGGCTTCTATCGTAAATATTACACAAGAAGCAAAGGTGGCGCACGGAACTTTTTATAATTACTTTC
CATCTAAAAAAGATATATTTGATGAATTGATTCACAGATTGAACCGTGAGTTACGCTTAATTATTAAAGGAGAAATGGAG
GGAATATCAAGTTACGAAGAGGCACAAAGGAGAGGTTTTCAGGCCTTCTTTCGATGGGTGAAAGATCGTCCTAATCTATA
TAATATTGTACAACAGGCGGTAGTTGTTGATGATAATTTATATAGATGGTATTATGCAAAGCTTGCAAATGGATTTTTAA
AAAGTTTATCGGCTGGTATGGAAGCGGGAGAGTTTAAATGGCTTGATAAAGAAACAATTGCGTATTGTCTTATGTCAATT
GGGCAATTTTTAGGAATGCGATGGGGTTATTGGGAAGAGAAAGATGTTCCAGAAGATGTATTTGAAGCAGCGATGTCATT
AATATTTGAAGGATTGAGAAAGAGATAG

Upstream 100 bases:

>100_bases
AAAACAGTTGCAGATTTTGTCTAACATTAATAATTGTAAAATTCAGAAATATATTCATAATCAAATCTAAGAGGTGATTC
AGGTGTCAGAAAAAATAATA

Downstream 100 bases:

>100_bases
GGGTGGGAGAATATGCAAGGCATTGCTTATTGGATTGAAAAACGGGCCTATTTACATCCAGATCGCATTGCCATTATTAC
AGAAGAGGAGGAAATGACAT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Tetr Family

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MDVKNLTTKGLETREKLLCAAEEVFGSKGYYEASIVNITQEAKVAHGTFYNYFPSKKDIFDELIHRLNRELRLIIKGEME
GISSYEEAQRRGFQAFFRWVKDRPNLYNIVQQAVVVDDNLYRWYYAKLANGFLKSLSAGMEAGEFKWLDKETIAYCLMSI
GQFLGMRWGYWEEKDVPEDVFEAAMSLIFEGLRKR

Sequences:

>Translated_195_residues
MDVKNLTTKGLETREKLLCAAEEVFGSKGYYEASIVNITQEAKVAHGTFYNYFPSKKDIFDELIHRLNRELRLIIKGEME
GISSYEEAQRRGFQAFFRWVKDRPNLYNIVQQAVVVDDNLYRWYYAKLANGFLKSLSAGMEAGEFKWLDKETIAYCLMSI
GQFLGMRWGYWEEKDVPEDVFEAAMSLIFEGLRKR
>Mature_195_residues
MDVKNLTTKGLETREKLLCAAEEVFGSKGYYEASIVNITQEAKVAHGTFYNYFPSKKDIFDELIHRLNRELRLIIKGEME
GISSYEEAQRRGFQAFFRWVKDRPNLYNIVQQAVVVDDNLYRWYYAKLANGFLKSLSAGMEAGEFKWLDKETIAYCLMSI
GQFLGMRWGYWEEKDVPEDVFEAAMSLIFEGLRKR

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22793; Mature: 22793

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVKNLTTKGLETREKLLCAAEEVFGSKGYYEASIVNITQEAKVAHGTFYNYFPSKKDIF
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCHHHHH
DELIHRLNRELRLIIKGEMEGISSYEEAQRRGFQAFFRWVKDRPNLYNIVQQAVVVDDNL
HHHHHHHHHHHEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCH
YRWYYAKLANGFLKSLSAGMEAGEFKWLDKETIAYCLMSIGQFLGMRWGYWEEKDVPEDV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
FEAAMSLIFEGLRKR
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MDVKNLTTKGLETREKLLCAAEEVFGSKGYYEASIVNITQEAKVAHGTFYNYFPSKKDIF
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCHHHHH
DELIHRLNRELRLIIKGEMEGISSYEEAQRRGFQAFFRWVKDRPNLYNIVQQAVVVDDNL
HHHHHHHHHHHEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCH
YRWYYAKLANGFLKSLSAGMEAGEFKWLDKETIAYCLMSIGQFLGMRWGYWEEKDVPEDV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
FEAAMSLIFEGLRKR
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA