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The map label for this gene is ycnJ [H]

Identifier: 49184786

GI number: 49184786

Start: 1798948

End: 1800582

Strand: Direct

Name: ycnJ [H]

Synonym: BAS1774

Alternate gene names: 49184786

Gene position: 1798948-1800582 (Clockwise)

Preceding gene: 49184785

Following gene: 49184787

Centisome position: 34.41

GC content: 33.82

Gene sequence:

>1635_bases
ATGAGAAGGATAGGGATATTGCTATTCATTGCATGTATGCTTATCATATTAATACCGAAAAGTGCATCTGCTCATGCGTA
CGTTGTGAAATCAAACCCTGCTGAAAATGAAACATTGAAGAAAGCACCATCTGTTGTGAAAATTGAATTCGATGAGGACA
TACAAGTTTCAAGTTTTAATACATTGTACGTGAGAGATACATCAGGTAAAAGGGTCGATTTAAAAGATGCTCATATTGAT
AAAAAGAATAAAAAGTTATTAGAAGCCGGATTAAAAGAGAATCTCAAAAACGGTCTGTACTCTATTCAGTGGAAAGTGAT
TTCAGCTGATGGCCATCCAATTCAAGGAGTTATTCCATTCCGTATTGGATTAGCAGAAGCGGAAGCAGACGATATACAAG
TGGAAGAGATGGGTTACGTCCCACAAATCGATATGATTATGGAACGTGGAATTTTATATACAAGTTTCTCACTATTTATA
GGCGTGCTATTCTTTAATCTTATTATGTATAAAGGGAACGTAATAGAAGTTCAATTAAGAAGTAAAAAAATAATATGGAT
CTCCTTATTTGGGATATTGATTAGCTTGTTATTCAATCTACCATTGCAAGCGAAAATAAATGCGGATGTTTCATGGCTAG
AAGCATTCAATCCTTTACTATTAAAAGAAACATTACAGCTTTCTGTTTTTGGTTATGTATGGATTACTCAAATGACTCTT
ATTAGTTCGCTTATAATCGTTACGTATTTTGCGATGAAGCGTGGGAAGCTTTCGTCGTTTAAAGTATGGAGCATTCCAAT
AGTATTGTTTATTGGGATACTTGTTATGAAAGCATGTAATAGTCACGCATATGGTTTAAAGTTTAAAGACATTGCTGTCG
TTATGGATTTTCTACATTTATTCGCAGCTTCATTATGGATTGGTGGTCTATCATCTATTATTCTTCTTTTACGTAATGAG
GATAACAAGTGGAGTATGTATTGGGATATGATTAAGCGTTTTTCACCGTGGGCAACATGTGCTGTCATTGTGATTTTCAT
AACAGGTCTTTTTAATAGTACATTTTTTATTCCAACAATCCACTCGTTATTTGATACGAAGTATGGATTAGCTTTATTAG
CAAAGATACTTTTATTCATTTTCATGGGGATATTAGGAATTATTCATTATGTGAAAGGGAAAATGAGAGCGGAGCAAGGA
TTAGGTGCTACGGTGAAAGTAGAGTTTATCATTGGAATTATCATTTTCGTAATCGTAGCTTTTATGACAAATGTACAAAC
ACCACCGATGCCTCCTATTGGACCTTTTACAGAGAGTAAACAATTAGATAATGGATATGAAATGACGCTAAATGTAAGTC
CTAATAAAGTAGGACAAAATATATTCCATATTACTTTAAAGGATGAGAACGGACAACCTGTTACTGATATGGAACAAATT
ATATTAACGACTCAATCGTTAGATATGAATATGGGAAAAGGTTCATTTAAAGTTTCGGCCGTTTCACCGGGAGAATATGA
AGCAGAAGGTATGTATATTAACATGACAGGTAACTGGAATATACAAGTACATGGATTAACAAAATCACTTGATAGCTTTG
ATACGGATTATAAGTTTATTGTAGGTGGCAGATAA

Upstream 100 bases:

>100_bases
TTTAATTAGGTTAATATTTCGCCCGAGAATTAAACTTGGGAAGTTAAAGTTATGAAAATAGAGCGATGAGGAAGAAAGAA
GTGAAATGAGTGTGAAAGTA

Downstream 100 bases:

>100_bases
AGTGAAACTTTAATCAGTGGGGTATCCCCCGCTGATTATTAGCACGCCCCCGCCTAACTTCTTTGCTTTGCGGGATAAAG
AGACGTTATAGATGAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MRRIGILLFIACMLIILIPKSASAHAYVVKSNPAENETLKKAPSVVKIEFDEDIQVSSFNTLYVRDTSGKRVDLKDAHID
KKNKKLLEAGLKENLKNGLYSIQWKVISADGHPIQGVIPFRIGLAEAEADDIQVEEMGYVPQIDMIMERGILYTSFSLFI
GVLFFNLIMYKGNVIEVQLRSKKIIWISLFGILISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWITQMTL
ISSLIIVTYFAMKRGKLSSFKVWSIPIVLFIGILVMKACNSHAYGLKFKDIAVVMDFLHLFAASLWIGGLSSIILLLRNE
DNKWSMYWDMIKRFSPWATCAVIVIFITGLFNSTFFIPTIHSLFDTKYGLALLAKILLFIFMGILGIIHYVKGKMRAEQG
LGATVKVEFIIGIIIFVIVAFMTNVQTPPMPPIGPFTESKQLDNGYEMTLNVSPNKVGQNIFHITLKDENGQPVTDMEQI
ILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDTDYKFIVGGR

Sequences:

>Translated_544_residues
MRRIGILLFIACMLIILIPKSASAHAYVVKSNPAENETLKKAPSVVKIEFDEDIQVSSFNTLYVRDTSGKRVDLKDAHID
KKNKKLLEAGLKENLKNGLYSIQWKVISADGHPIQGVIPFRIGLAEAEADDIQVEEMGYVPQIDMIMERGILYTSFSLFI
GVLFFNLIMYKGNVIEVQLRSKKIIWISLFGILISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWITQMTL
ISSLIIVTYFAMKRGKLSSFKVWSIPIVLFIGILVMKACNSHAYGLKFKDIAVVMDFLHLFAASLWIGGLSSIILLLRNE
DNKWSMYWDMIKRFSPWATCAVIVIFITGLFNSTFFIPTIHSLFDTKYGLALLAKILLFIFMGILGIIHYVKGKMRAEQG
LGATVKVEFIIGIIIFVIVAFMTNVQTPPMPPIGPFTESKQLDNGYEMTLNVSPNKVGQNIFHITLKDENGQPVTDMEQI
ILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDTDYKFIVGGR
>Mature_544_residues
MRRIGILLFIACMLIILIPKSASAHAYVVKSNPAENETLKKAPSVVKIEFDEDIQVSSFNTLYVRDTSGKRVDLKDAHID
KKNKKLLEAGLKENLKNGLYSIQWKVISADGHPIQGVIPFRIGLAEAEADDIQVEEMGYVPQIDMIMERGILYTSFSLFI
GVLFFNLIMYKGNVIEVQLRSKKIIWISLFGILISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWITQMTL
ISSLIIVTYFAMKRGKLSSFKVWSIPIVLFIGILVMKACNSHAYGLKFKDIAVVMDFLHLFAASLWIGGLSSIILLLRNE
DNKWSMYWDMIKRFSPWATCAVIVIFITGLFNSTFFIPTIHSLFDTKYGLALLAKILLFIFMGILGIIHYVKGKMRAEQG
LGATVKVEFIIGIIIFVIVAFMTNVQTPPMPPIGPFTESKQLDNGYEMTLNVSPNKVGQNIFHITLKDENGQPVTDMEQI
ILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDTDYKFIVGGR

Specific function: Involved in uptake of extracellular oxidized copper under copper-limiting conditions [H]

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the CopD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR008457
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC; PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 61156; Mature: 61156

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIGILLFIACMLIILIPKSASAHAYVVKSNPAENETLKKAPSVVKIEFDEDIQVSSFN
CCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCEEEECCE
TLYVRDTSGKRVDLKDAHIDKKNKKLLEAGLKENLKNGLYSIQWKVISADGHPIQGVIPF
EEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEE
RIGLAEAEADDIQVEEMGYVPQIDMIMERGILYTSFSLFIGVLFFNLIMYKGNVIEVQLR
EEEECCCCCCCEEHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
SKKIIWISLFGILISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWITQMTL
CCEEEEHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ISSLIIVTYFAMKRGKLSSFKVWSIPIVLFIGILVMKACNSHAYGLKFKDIAVVMDFLHL
HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
FAASLWIGGLSSIILLLRNEDNKWSMYWDMIKRFSPWATCAVIVIFITGLFNSTFFIPTI
HHHHHHHCCHHHEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEHHHHH
HSLFDTKYGLALLAKILLFIFMGILGIIHYVKGKMRAEQGLGATVKVEFIIGIIIFVIVA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
FMTNVQTPPMPPIGPFTESKQLDNGYEMTLNVSPNKVGQNIFHITLKDENGQPVTDMEQI
HHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCEEEEEEECCCCCCCHHHHHH
ILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDTDYKFI
HEECCCCCCCCCCCCEEEEEECCCCEECCEEEEEEECCEEEEEEEEHHHHCCCCCCCEEE
VGGR
ECCC
>Mature Secondary Structure
MRRIGILLFIACMLIILIPKSASAHAYVVKSNPAENETLKKAPSVVKIEFDEDIQVSSFN
CCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHCCCEEEEEECCCEEEECCE
TLYVRDTSGKRVDLKDAHIDKKNKKLLEAGLKENLKNGLYSIQWKVISADGHPIQGVIPF
EEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEE
RIGLAEAEADDIQVEEMGYVPQIDMIMERGILYTSFSLFIGVLFFNLIMYKGNVIEVQLR
EEEECCCCCCCEEHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
SKKIIWISLFGILISLLFNLPLQAKINADVSWLEAFNPLLLKETLQLSVFGYVWITQMTL
CCEEEEHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ISSLIIVTYFAMKRGKLSSFKVWSIPIVLFIGILVMKACNSHAYGLKFKDIAVVMDFLHL
HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
FAASLWIGGLSSIILLLRNEDNKWSMYWDMIKRFSPWATCAVIVIFITGLFNSTFFIPTI
HHHHHHHCCHHHEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEHHHHH
HSLFDTKYGLALLAKILLFIFMGILGIIHYVKGKMRAEQGLGATVKVEFIIGIIIFVIVA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
FMTNVQTPPMPPIGPFTESKQLDNGYEMTLNVSPNKVGQNIFHITLKDENGQPVTDMEQI
HHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCEEEEEEECCCCCCCHHHHHH
ILTTQSLDMNMGKGSFKVSAVSPGEYEAEGMYINMTGNWNIQVHGLTKSLDSFDTDYKFI
HEECCCCCCCCCCCCEEEEEECCCCEECCEEEEEEECCEEEEEEEEHHHHCCCCCCCEEE
VGGR
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]