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The map label for this gene is glnL [H]

Identifier: 49184684

GI number: 49184684

Start: 1687338

End: 1688270

Strand: Direct

Name: glnL [H]

Synonym: BAS1670

Alternate gene names: 49184684

Gene position: 1687338-1688270 (Clockwise)

Preceding gene: 49184683

Following gene: 49184685

Centisome position: 32.27

GC content: 35.05

Gene sequence:

>933_bases
TTGTTTTATTATATCGTAGATGATGATGAAGTTTTCCGTTCGATGCTTTCGCAAATTATTGAGGATGGCGATCTTGGGGA
AGTAATTGGAGAATCGGAAGATGGAGCGTTTATTGAAGCAGAACAGTTAAATTATAAAAAAGTGGACATTTTATTTATTG
ATTTACTAATGCCGATGAGAGACGGCATTGAAACAGTTCGCCATATAGCATCTTCATTTACTGGGAAAATTATTATGATT
TCCCAAGTTGAATCGAAACAGCTCATTGGTGAGGCATATACACTTGGTGTGGAATATTATATTACAAAACCACTAAACAA
AATAGAAGTAGTATCTGTTGTACGAAAAGTGATAGAACGTATTCGTTTGGAACGTTCTATATATGACATTCAAAAATCAT
TGAATAATGTGTTTCAGTGGGAAAAGCCGCAAATGCGTAATGAAACAGTGCAAGAAGGGAAAAAGATATCAGATTCAGGA
CGCTTCTTACTATCAGAACTCGGTATTGCGGGAGAGAACGGAAGTAAAGATTTACTTAGTATGCTGGAATATTTATATGG
ACAAGAAAAGGCTCAAACATTTGAGTTTGGATTTCCTGCTTTAAAAGATATCTTTCACCAAATAACAGTAAAAAAATTAG
GGGAACTAGCTTCAGATGCAGATATAGAGAAGGAGAGAAAAGCATCTGAACAACGTGTAAGAAGAGCAATTTATCAATCA
TTAAATCATTTAGCCTCCCTTGGACTAACAGACTTTTCAAATCCGAAATTTGAAAGTTATGCTCCGAAGTTTTTTGATTT
CACTGTAGTTAGAAAACGGATGACAGAAATGACAAAGGATGAGGTAGCGACTTCCGGTCATATACGAATTAATACGAAAA
AATTTATTCAAGTGTTGTATTTTGAGGCGAAACGACTGATGGAGATAGAGTGA

Upstream 100 bases:

>100_bases
TCGGCGGAGAAGTAAGGTTAGAAGACAATGAAAATGGGAACGGGTGTAAGTTTATTGTTTGTTTACCGGAGTGCAGTTTA
AAGCGGGAAGGGGAATAGGT

Downstream 100 bases:

>100_bases
AAAGATGCTTATAGATAAGCATCTTTTTTTGTTAAATCAATATTTTATATTTTCTCGTGAAGCATGTAAAATGTTAAGTA
AGAGAAAATGGTTTTACATT

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MFYYIVDDDEVFRSMLSQIIEDGDLGEVIGESEDGAFIEAEQLNYKKVDILFIDLLMPMRDGIETVRHIASSFTGKIIMI
SQVESKQLIGEAYTLGVEYYITKPLNKIEVVSVVRKVIERIRLERSIYDIQKSLNNVFQWEKPQMRNETVQEGKKISDSG
RFLLSELGIAGENGSKDLLSMLEYLYGQEKAQTFEFGFPALKDIFHQITVKKLGELASDADIEKERKASEQRVRRAIYQS
LNHLASLGLTDFSNPKFESYAPKFFDFTVVRKRMTEMTKDEVATSGHIRINTKKFIQVLYFEAKRLMEIE

Sequences:

>Translated_310_residues
MFYYIVDDDEVFRSMLSQIIEDGDLGEVIGESEDGAFIEAEQLNYKKVDILFIDLLMPMRDGIETVRHIASSFTGKIIMI
SQVESKQLIGEAYTLGVEYYITKPLNKIEVVSVVRKVIERIRLERSIYDIQKSLNNVFQWEKPQMRNETVQEGKKISDSG
RFLLSELGIAGENGSKDLLSMLEYLYGQEKAQTFEFGFPALKDIFHQITVKKLGELASDADIEKERKASEQRVRRAIYQS
LNHLASLGLTDFSNPKFESYAPKFFDFTVVRKRMTEMTKDEVATSGHIRINTKKFIQVLYFEAKRLMEIE
>Mature_310_residues
MFYYIVDDDEVFRSMLSQIIEDGDLGEVIGESEDGAFIEAEQLNYKKVDILFIDLLMPMRDGIETVRHIASSFTGKIIMI
SQVESKQLIGEAYTLGVEYYITKPLNKIEVVSVVRKVIERIRLERSIYDIQKSLNNVFQWEKPQMRNETVQEGKKISDSG
RFLLSELGIAGENGSKDLLSMLEYLYGQEKAQTFEFGFPALKDIFHQITVKKLGELASDADIEKERKASEQRVRRAIYQS
LNHLASLGLTDFSNPKFESYAPKFFDFTVVRKRMTEMTKDEVATSGHIRINTKKFIQVLYFEAKRLMEIE

Specific function: Member of the two-component regulatory system glnL/glnK that positively regulates the expression of the glsA-glnT operon in response to glutamine. GlnL binds the promoter region of glsA- glnT in vitro [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR013972 [H]

Pfam domain/function: PF00072 Response_reg; PF08664 YcbB [H]

EC number: NA

Molecular weight: Translated: 35782; Mature: 35782

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYYIVDDDEVFRSMLSQIIEDGDLGEVIGESEDGAFIEAEQLNYKKVDILFIDLLMPMR
CEEEEECCHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHH
DGIETVRHIASSFTGKIIMISQVESKQLIGEAYTLGVEYYITKPLNKIEVVSVVRKVIER
HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHH
IRLERSIYDIQKSLNNVFQWEKPQMRNETVQEGKKISDSGRFLLSELGIAGENGSKDLLS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHH
MLEYLYGQEKAQTFEFGFPALKDIFHQITVKKLGELASDADIEKERKASEQRVRRAIYQS
HHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LNHLASLGLTDFSNPKFESYAPKFFDFTVVRKRMTEMTKDEVATSGHIRINTKKFIQVLY
HHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHH
FEAKRLMEIE
HHHHHHHCCC
>Mature Secondary Structure
MFYYIVDDDEVFRSMLSQIIEDGDLGEVIGESEDGAFIEAEQLNYKKVDILFIDLLMPMR
CEEEEECCHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHH
DGIETVRHIASSFTGKIIMISQVESKQLIGEAYTLGVEYYITKPLNKIEVVSVVRKVIER
HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHH
IRLERSIYDIQKSLNNVFQWEKPQMRNETVQEGKKISDSGRFLLSELGIAGENGSKDLLS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHH
MLEYLYGQEKAQTFEFGFPALKDIFHQITVKKLGELASDADIEKERKASEQRVRRAIYQS
HHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LNHLASLGLTDFSNPKFESYAPKFFDFTVVRKRMTEMTKDEVATSGHIRINTKKFIQVLY
HHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHH
FEAKRLMEIE
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8011666; 7704254; 9384377 [H]