Click here to switch to the map view.

The map label for this gene is yfiN [H]

Identifier: 49184677

GI number: 49184677

Start: 1677811

End: 1678953

Strand: Direct

Name: yfiN [H]

Synonym: BAS1663

Alternate gene names: 49184677

Gene position: 1677811-1678953 (Clockwise)

Preceding gene: 49184676

Following gene: 49184678

Centisome position: 32.09

GC content: 31.5

Gene sequence:

>1143_bases
ATGAAAGATATTTTATGGCTCATACAAAAAACGTTATCTGTACTTTTGAAAAATAAAAAAAGTTTACTTATTATTAGTTT
GCCGATAATAGGAACATTAATCTCCTTCTCAATGTATGGGAATGTAGGGCAAGGGACGTTAAATATCGGGGTTATAAATA
AAGAAAATCAACCTATAGCAAATGATACGGTGAAATTTCTAGAAGGGTTAAATCATGTAAAGGTAAGTAAAATTAAAGAG
TCTGAAGTAGAAGATAAACTCACTTCCAAAAAACTTGATGGTGTTATTACATTAGATTCTGGTTTTTCTGAAAGTGTTCG
AGAAGGGAAACCTGATCATATTGAGATTTCATCAATTAAAGGGGATCAAGTAACAGTATTCATAAAATCATATTTATATA
ACTATATTGATAATATTGTAGCGATTAGTAAAGTGGCAGGGACGGATCAAAGTACGTTTAATAGTATGTACGCTGGTTAT
CAAAAGAATTTATTTAAAGTAAAGTCTGAGACACTTACAGATACTTCGAAAAATAAAGATATGACAAACCAAACGATGGG
TTATCTTATTATGTTTATGTTATTTTCAGCAGCGAACTTATCAGGATATATTTTAAAAGAAAAAGAAAATAGAACGTATT
TTAGGCTCTTAACAACGCCGATAGATGGGAAGAAATTCATATTATCTAATGTCGGGGTCAATATGATGATACTAACAATA
CAAATTTTAATTACAATCCTATTCCTAACGAATGTTTTTCATACGAATATCAATATGCCTTTCATAGTGATGATTGGCGT
ACTAATGCTATTTGCTTTAATAGCGATTGGAATATCATTAGTTCTTGTTGCTTTTTCGAAAAACTCAGCATCGGCAAATA
CGATGCAAAATCTGGTCATTGTACCAACATGTTTACTTGCCGGATGTTATTTTCCATATGACATTATGCCAAAAGCGGTA
CAAAAAGTAGCTGATTTCCTTCCGCAGCGTTGGTTACTAGACACGATAGCAAAACTACAGCAAGGAATTCCATTTTCAGA
GTTGTATGTAAACATTTTAATCTTATTCGCCTTTGCGGTAGCATTCTTCTTAATTGCAATTTATAAGTTTGGAAGAAATA
ATGATGCGAGAAACTTTGTTTAA

Upstream 100 bases:

>100_bases
GTAGGAGCAGCACTGCCGGTAATCTCTTTAAACCTTGGCATTTCAGCACTCTTTTTATTAATTGCGATTATTGCATTACG
TAGACGGGAGGGGCTATAGT

Downstream 100 bases:

>100_bases
TATGAAAAGGGTTTGACGTTAAGTCGCATCCTTTTTGTATGAAGCATGAAATCTAAATTTGAATGCCAAAATAGTAGGGT
GGAAAGAAAAATGAGCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MKDILWLIQKTLSVLLKNKKSLLIISLPIIGTLISFSMYGNVGQGTLNIGVINKENQPIANDTVKFLEGLNHVKVSKIKE
SEVEDKLTSKKLDGVITLDSGFSESVREGKPDHIEISSIKGDQVTVFIKSYLYNYIDNIVAISKVAGTDQSTFNSMYAGY
QKNLFKVKSETLTDTSKNKDMTNQTMGYLIMFMLFSAANLSGYILKEKENRTYFRLLTTPIDGKKFILSNVGVNMMILTI
QILITILFLTNVFHTNINMPFIVMIGVLMLFALIAIGISLVLVAFSKNSASANTMQNLVIVPTCLLAGCYFPYDIMPKAV
QKVADFLPQRWLLDTIAKLQQGIPFSELYVNILILFAFAVAFFLIAIYKFGRNNDARNFV

Sequences:

>Translated_380_residues
MKDILWLIQKTLSVLLKNKKSLLIISLPIIGTLISFSMYGNVGQGTLNIGVINKENQPIANDTVKFLEGLNHVKVSKIKE
SEVEDKLTSKKLDGVITLDSGFSESVREGKPDHIEISSIKGDQVTVFIKSYLYNYIDNIVAISKVAGTDQSTFNSMYAGY
QKNLFKVKSETLTDTSKNKDMTNQTMGYLIMFMLFSAANLSGYILKEKENRTYFRLLTTPIDGKKFILSNVGVNMMILTI
QILITILFLTNVFHTNINMPFIVMIGVLMLFALIAIGISLVLVAFSKNSASANTMQNLVIVPTCLLAGCYFPYDIMPKAV
QKVADFLPQRWLLDTIAKLQQGIPFSELYVNILILFAFAVAFFLIAIYKFGRNNDARNFV
>Mature_380_residues
MKDILWLIQKTLSVLLKNKKSLLIISLPIIGTLISFSMYGNVGQGTLNIGVINKENQPIANDTVKFLEGLNHVKVSKIKE
SEVEDKLTSKKLDGVITLDSGFSESVREGKPDHIEISSIKGDQVTVFIKSYLYNYIDNIVAISKVAGTDQSTFNSMYAGY
QKNLFKVKSETLTDTSKNKDMTNQTMGYLIMFMLFSAANLSGYILKEKENRTYFRLLTTPIDGKKFILSNVGVNMMILTI
QILITILFLTNVFHTNINMPFIVMIGVLMLFALIAIGISLVLVAFSKNSASANTMQNLVIVPTCLLAGCYFPYDIMPKAV
QKVADFLPQRWLLDTIAKLQQGIPFSELYVNILILFAFAVAFFLIAIYKFGRNNDARNFV

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42536; Mature: 42536

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDILWLIQKTLSVLLKNKKSLLIISLPIIGTLISFSMYGNVGQGTLNIGVINKENQPIA
CHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCH
NDTVKFLEGLNHVKVSKIKESEVEDKLTSKKLDGVITLDSGFSESVREGKPDHIEISSIK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCEEEEEECC
GDQVTVFIKSYLYNYIDNIVAISKVAGTDQSTFNSMYAGYQKNLFKVKSETLTDTSKNKD
CCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
MTNQTMGYLIMFMLFSAANLSGYILKEKENRTYFRLLTTPIDGKKFILSNVGVNMMILTI
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHCCHHHHHHHH
QILITILFLTNVFHTNINMPFIVMIGVLMLFALIAIGISLVLVAFSKNSASANTMQNLVI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VPTCLLAGCYFPYDIMPKAVQKVADFLPQRWLLDTIAKLQQGIPFSELYVNILILFAFAV
HHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AFFLIAIYKFGRNNDARNFV
HHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKDILWLIQKTLSVLLKNKKSLLIISLPIIGTLISFSMYGNVGQGTLNIGVINKENQPIA
CHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCH
NDTVKFLEGLNHVKVSKIKESEVEDKLTSKKLDGVITLDSGFSESVREGKPDHIEISSIK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCEEEEEECC
GDQVTVFIKSYLYNYIDNIVAISKVAGTDQSTFNSMYAGYQKNLFKVKSETLTDTSKNKD
CCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
MTNQTMGYLIMFMLFSAANLSGYILKEKENRTYFRLLTTPIDGKKFILSNVGVNMMILTI
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHCCHHHHHHHH
QILITILFLTNVFHTNINMPFIVMIGVLMLFALIAIGISLVLVAFSKNSASANTMQNLVI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VPTCLLAGCYFPYDIMPKAVQKVADFLPQRWLLDTIAKLQQGIPFSELYVNILILFAFAV
HHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AFFLIAIYKFGRNNDARNFV
HHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]