Click here to switch to the map view.

The map label for this gene is glpP [H]

Identifier: 49183560

GI number: 49183560

Start: 572591

End: 573157

Strand: Direct

Name: glpP [H]

Synonym: BAS0534

Alternate gene names: 49183560

Gene position: 572591-573157 (Clockwise)

Preceding gene: 49183559

Following gene: 49183561

Centisome position: 10.95

GC content: 35.8

Gene sequence:

>567_bases
ATGTTTAAGGAACCTTATATTGCGATGATAAAGGATTGGAAAGGATACAACACATACAAAAAGTTACCGAAAACAGTTTT
TCTTATGACCGGTTCAATGCTGGAATTACCAGAGCGTGTATATGAATTACAGAAACATGGACATGATGTCTTTCTTCATT
GTGATTTTATACAAGGTTTAAATACGAATACAGAGGAAGCACTTTCGTATATTCAAGACGTTATCGGAGCACAAGGCATT
ATTTCAACAAAAGGATCGACAATTCGAAATGCCAATAAAATTGGATTAAAAACGATCCAACGTATTTCTATTGTCGATAC
TTTATCTCTTACAAAATCAATTGAAAATTGTAAAACGACTAAACCGAATGCAGTAGAGATTATGCCTGGTATTATGCCTT
CAATTATTAAGCAGTTAGCAGAGGAAATAGAATTTCCTATCATTGCAGGCGGATTGATTCAAACGCGAGAAGATGCAGAA
ATTGCTATTCGTTCGGGAGCGAGCGCGATTTCGACGAGTCACTATGAAGTATGGATACAAGAAGAAAAAAGGAGTGCAAT
CTTGTGA

Upstream 100 bases:

>100_bases
TAGGTGTGCTCTATTCCCTAGAGTTCAAATAAGGAGAAAGGCGTTCTATGTAAGTAGGTGTTTTTAGTTTGGATAAAAAT
AGAAAAGCTAGGTGGAATGA

Downstream 100 bases:

>100_bases
TTGAATTGAAAAATGTTTCAAAGGTATATCAAAATGCAGAGGAGACAGCGGTTAAAGGTGTATCGGTTCATATTAAGAAG
GGAGAATTTTTTGTTTTAGT

Product: glycerol uptake operon antiterminator regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MFKEPYIAMIKDWKGYNTYKKLPKTVFLMTGSMLELPERVYELQKHGHDVFLHCDFIQGLNTNTEEALSYIQDVIGAQGI
ISTKGSTIRNANKIGLKTIQRISIVDTLSLTKSIENCKTTKPNAVEIMPGIMPSIIKQLAEEIEFPIIAGGLIQTREDAE
IAIRSGASAISTSHYEVWIQEEKRSAIL

Sequences:

>Translated_188_residues
MFKEPYIAMIKDWKGYNTYKKLPKTVFLMTGSMLELPERVYELQKHGHDVFLHCDFIQGLNTNTEEALSYIQDVIGAQGI
ISTKGSTIRNANKIGLKTIQRISIVDTLSLTKSIENCKTTKPNAVEIMPGIMPSIIKQLAEEIEFPIIAGGLIQTREDAE
IAIRSGASAISTSHYEVWIQEEKRSAIL
>Mature_188_residues
MFKEPYIAMIKDWKGYNTYKKLPKTVFLMTGSMLELPERVYELQKHGHDVFLHCDFIQGLNTNTEEALSYIQDVIGAQGI
ISTKGSTIRNANKIGLKTIQRISIVDTLSLTKSIENCKTTKPNAVEIMPGIMPSIIKQLAEEIEFPIIAGGLIQTREDAE
IAIRSGASAISTSHYEVWIQEEKRSAIL

Specific function: In the presence of glycerol 3-phosphate, this protein is thought to enhance transcription [H]

COG id: COG1954

COG function: function code K; Glycerol-3-phosphate responsive antiterminator (mRNA-binding)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygcP [H]

Homologues:

Organism=Escherichia coli, GI1789127, Length=186, Percent_Identity=32.258064516129, Blast_Score=104, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006699 [H]

Pfam domain/function: PF04309 G3P_antiterm [H]

EC number: NA

Molecular weight: Translated: 21073; Mature: 21073

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKEPYIAMIKDWKGYNTYKKLPKTVFLMTGSMLELPERVYELQKHGHDVFLHCDFIQGL
CCCCCHHHEECCCCCCCHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCC
NTNTEEALSYIQDVIGAQGIISTKGSTIRNANKIGLKTIQRISIVDTLSLTKSIENCKTT
CCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KPNAVEIMPGIMPSIIKQLAEEIEFPIIAGGLIQTREDAEIAIRSGASAISTSHYEVWIQ
CCCCEEECCCHHHHHHHHHHHHCCCCEEECCHHCCCCCHHHHHHCCCCHHCCCCEEEEEE
EEKRSAIL
ECCCCCCC
>Mature Secondary Structure
MFKEPYIAMIKDWKGYNTYKKLPKTVFLMTGSMLELPERVYELQKHGHDVFLHCDFIQGL
CCCCCHHHEECCCCCCCHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCC
NTNTEEALSYIQDVIGAQGIISTKGSTIRNANKIGLKTIQRISIVDTLSLTKSIENCKTT
CCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KPNAVEIMPGIMPSIIKQLAEEIEFPIIAGGLIQTREDAEIAIRSGASAISTSHYEVWIQ
CCCCEEECCCHHHHHHHHHHHHCCCCEEECCHHCCCCCHHHHHHCCCCHHCCCCEEEEEE
EEKRSAIL
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8436953; 9579061; 9384377 [H]