Click here to switch to the map view.

The map label for this gene is dctR [H]

Identifier: 49183554

GI number: 49183554

Start: 567690

End: 568073

Strand: Direct

Name: dctR [H]

Synonym: BAS0528

Alternate gene names: 49183554

Gene position: 567690-568073 (Clockwise)

Preceding gene: 49183553

Following gene: 49183555

Centisome position: 10.86

GC content: 38.54

Gene sequence:

>384_bases
ATGGGGGAGGAGATTGAAGTATTGATTGTAGAAGATGATATTCGAATTGCGGATATTCATCGTCGTTTTACTGAAAAGAT
TGAGGGATTTAAAGTAATTGGAACAGCAACAACTGGCGAACAAGCGAAAGAATGGCTAGATCTTGTGAAGCCACAGCTCG
TTTTATTAGACGTGTACTTACCTGATATGCAAGGAACGGAACTTGTCACATATATTAGGCATCATTTACATGATATAGAT
ATTATTATGATTACAGCTGCATCGGAAACAGATGTAGTGAGGCACGCCCTGCGGGGCGGAGTAACAGATTATATCGTAAA
GCCACTTATGTTTGATCGATTTAAAGCAAGTTTGGAAAATTACCAAAAAAGCTTGTGCAGTTAA

Upstream 100 bases:

>100_bases
AGTTAGTAGAAGATTTAAATGGAAGTATCGCAATCGAAAAAGGGGATTTAGGTGGTGCATTGTTTATTATTGCACTACCA
AAAGAGAGGGGCGATTTGTA

Downstream 100 bases:

>100_bases
AGAAAAATAACAAATTATCTATCGAACAAATAGAACATCTATGGTCTCAAAGAGGCGTAAAGGGAAATGAAATAGAATAT
GCCCCGAAAGGTATAGACCC

Product: two-component response regulator, citrate/malate, N-terminus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MGEEIEVLIVEDDIRIADIHRRFTEKIEGFKVIGTATTGEQAKEWLDLVKPQLVLLDVYLPDMQGTELVTYIRHHLHDID
IIMITAASETDVVRHALRGGVTDYIVKPLMFDRFKASLENYQKSLCS

Sequences:

>Translated_127_residues
MGEEIEVLIVEDDIRIADIHRRFTEKIEGFKVIGTATTGEQAKEWLDLVKPQLVLLDVYLPDMQGTELVTYIRHHLHDID
IIMITAASETDVVRHALRGGVTDYIVKPLMFDRFKASLENYQKSLCS
>Mature_126_residues
GEEIEVLIVEDDIRIADIHRRFTEKIEGFKVIGTATTGEQAKEWLDLVKPQLVLLDVYLPDMQGTELVTYIRHHLHDIDI
IMITAASETDVVRHALRGGVTDYIVKPLMFDRFKASLENYQKSLCS

Specific function: Member of the two-component regulatory system dctS/dctR. Essential for expression of dctP [H]

COG id: COG4565

COG function: function code KT; Response regulator of citrate/malate metabolism

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786838, Length=123, Percent_Identity=34.9593495934959, Blast_Score=85, Evalue=1e-18,
Organism=Escherichia coli, GI1790566, Length=121, Percent_Identity=34.7107438016529, Blast_Score=84, Evalue=2e-18,
Organism=Escherichia coli, GI1788222, Length=103, Percent_Identity=33.0097087378641, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR013196
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 14542; Mature: 14411

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEEIEVLIVEDDIRIADIHRRFTEKIEGFKVIGTATTGEQAKEWLDLVKPQLVLLDVYL
CCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEEC
PDMQGTELVTYIRHHLHDIDIIMITAASETDVVRHALRGGVTDYIVKPLMFDRFKASLEN
CCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
YQKSLCS
HHHHHCC
>Mature Secondary Structure 
GEEIEVLIVEDDIRIADIHRRFTEKIEGFKVIGTATTGEQAKEWLDLVKPQLVLLDVYL
CCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEEC
PDMQGTELVTYIRHHLHDIDIIMITAASETDVVRHALRGGVTDYIVKPLMFDRFKASLEN
CCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
YQKSLCS
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]