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The map label for this gene is ymfN [H]

Identifier: 49183471

GI number: 49183471

Start: 464555

End: 466243

Strand: Direct

Name: ymfN [H]

Synonym: BAS0443

Alternate gene names: 49183471

Gene position: 464555-466243 (Clockwise)

Preceding gene: 49183470

Following gene: 49183472

Centisome position: 8.88

GC content: 35.41

Gene sequence:

>1689_bases
ATGAGGGTACAATATCCATTATCGTATAATCCAATTATCGAATACTACAACAAGATTGAATCCGGAGAAGAAATTGTAGG
ATATAAGGTTAAGAGAATATATAAGAAGCTTGTAGATGATATTTATGACCAAGATTCAATATACGAATATAATCCCAAAA
GAGCCAATCATGCAATGGAGTTCATTGAGAATTTTTGCAAGCATTCAAAGGGGAAATGGGCTGGAAAACCTATTGACCTT
GAGCTATGGCAAAAAGCATTTATTGGTTCTTTATTTGGATTTATTCACAAAATAGATGGCACACGAAAATATCGTGAGGC
CCTTTTAATCGTGGCCCGTAAAAATGGTAAGTCCACATTATCATCTGGTATTTGCTTATATCTACAGATAGCAGATGGAG
AAGGTGGAGCTGAAGTTTATGCGGTAGCAACAAAAGAAAAACAGGCGAAAATTGTTTGGTCTGAAGCAAAACGAATGGTA
AAAAAATCACCAGTTCTTTCAAAACGTATTAAAGCATTAGTGAAAGAATTAAATGCAGATTTTAATGACAGTACATTTCA
GCCTGTTGGTAGTGATAGTGATACATTAGATGGTCTGAATGTTCACGGTGCCTCGCTTGATGAAATTCACGCTTGGAAAG
ATAAGAATCTTTATGATGTTATTGTGGATGGAACATCAGCCCGGGAACAACCGCTTATCCTTATGATTACGACAGCTGGT
ACTGTCCGGGAATCTGTATATGATATGAAGTACGAAGAAGCAGAAAGGCTTTTGTTGAGTCTGGACGATGAAAAAGAATA
TACGGATCCGACATTTTTACCGATTATTTATGAGTTAGACAGTCGTAAGGAATGGACAGACCCGAAATGCTGGAAAAAAG
CTAATCCAGGTTTAGGAACAATCAAGAAAATCGATAATCTTCAAACGAAAGTAAATAAGGCACAAGCTAATCCTTTACTT
GTTAAAAACTTACTAACAAAGGATTTTAATGTGCGAGAAACTTCAAGTGAAGCATGGTTAACATTTGAACAATTGAATAA
CAAACAAACCTTTGATGTGATGGAACTAAAACCTAATTATGGTATTGGTGGAACGGATTTGTCCGAAACGACCGATTTAA
CCGCGGCAAAGGTTATTTTTATGCTCCCAAACGATATAAATGTATATGTCTTACAGATGTATTGGCTTCCTGAAGAGTTA
TTGGAACAACGATCTAAGGAAGATAAAATACCATATGATTTATGGCATGAAGCTGGTTACTTAAGAACGACTCCTGGTAA
CAGTATTCACCCTAAATTTGTTACTGAATGGTTCTTAGAAATAAGAGATGAGTATGGAATTTATTTACCGTGGATTGGTT
ACGATAGATGGTCCGCGAAATATTGGGTTGAGGAAATGCAGGGTTACTTTGGGAAAGAAGCTATGGTTCCTGTTGCGCAA
GGTAAACAAACTTTATCTATGCCGATGAAGCTTCTTGGAGCAGATTTAGAAGCGAAGAGAATTATATATAATAATAATCC
TATTGATAAATGGTGTTTATCGAATACGGCTATTGATATTGATAAAAACCTTAATATACAACCTGATAAAACGAATAATC
AGCGTAGAAGAATTGATGGAACAGCAGCTCTTTTAGATGCATACGTAGTTTTACAAGAAAAGAAAAATGATTATCTAAAT
ATGATTTAA

Upstream 100 bases:

>100_bases
GTTATCAAACAATCATGAAACAGCTTGGCGATTATATACCGAAAAAACCTATTGAAAATAAGGAAAAGGATGATGGATTT
GATGACTTCGTGACGAACAG

Downstream 100 bases:

>100_bases
AGGGGGTGAAAACTTGGGGCTATTTAATAAGATATTCGGAAAGAAGCAACCACCTACTACAACTCGTTTTGAAATGATAA
ACGACAATGGAGGAGGCTTT

Product: prophage LambdaBa04, terminase, large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MRVQYPLSYNPIIEYYNKIESGEEIVGYKVKRIYKKLVDDIYDQDSIYEYNPKRANHAMEFIENFCKHSKGKWAGKPIDL
ELWQKAFIGSLFGFIHKIDGTRKYREALLIVARKNGKSTLSSGICLYLQIADGEGGAEVYAVATKEKQAKIVWSEAKRMV
KKSPVLSKRIKALVKELNADFNDSTFQPVGSDSDTLDGLNVHGASLDEIHAWKDKNLYDVIVDGTSAREQPLILMITTAG
TVRESVYDMKYEEAERLLLSLDDEKEYTDPTFLPIIYELDSRKEWTDPKCWKKANPGLGTIKKIDNLQTKVNKAQANPLL
VKNLLTKDFNVRETSSEAWLTFEQLNNKQTFDVMELKPNYGIGGTDLSETTDLTAAKVIFMLPNDINVYVLQMYWLPEEL
LEQRSKEDKIPYDLWHEAGYLRTTPGNSIHPKFVTEWFLEIRDEYGIYLPWIGYDRWSAKYWVEEMQGYFGKEAMVPVAQ
GKQTLSMPMKLLGADLEAKRIIYNNNPIDKWCLSNTAIDIDKNLNIQPDKTNNQRRRIDGTAALLDAYVVLQEKKNDYLN
MI

Sequences:

>Translated_562_residues
MRVQYPLSYNPIIEYYNKIESGEEIVGYKVKRIYKKLVDDIYDQDSIYEYNPKRANHAMEFIENFCKHSKGKWAGKPIDL
ELWQKAFIGSLFGFIHKIDGTRKYREALLIVARKNGKSTLSSGICLYLQIADGEGGAEVYAVATKEKQAKIVWSEAKRMV
KKSPVLSKRIKALVKELNADFNDSTFQPVGSDSDTLDGLNVHGASLDEIHAWKDKNLYDVIVDGTSAREQPLILMITTAG
TVRESVYDMKYEEAERLLLSLDDEKEYTDPTFLPIIYELDSRKEWTDPKCWKKANPGLGTIKKIDNLQTKVNKAQANPLL
VKNLLTKDFNVRETSSEAWLTFEQLNNKQTFDVMELKPNYGIGGTDLSETTDLTAAKVIFMLPNDINVYVLQMYWLPEEL
LEQRSKEDKIPYDLWHEAGYLRTTPGNSIHPKFVTEWFLEIRDEYGIYLPWIGYDRWSAKYWVEEMQGYFGKEAMVPVAQ
GKQTLSMPMKLLGADLEAKRIIYNNNPIDKWCLSNTAIDIDKNLNIQPDKTNNQRRRIDGTAALLDAYVVLQEKKNDYLN
MI
>Mature_562_residues
MRVQYPLSYNPIIEYYNKIESGEEIVGYKVKRIYKKLVDDIYDQDSIYEYNPKRANHAMEFIENFCKHSKGKWAGKPIDL
ELWQKAFIGSLFGFIHKIDGTRKYREALLIVARKNGKSTLSSGICLYLQIADGEGGAEVYAVATKEKQAKIVWSEAKRMV
KKSPVLSKRIKALVKELNADFNDSTFQPVGSDSDTLDGLNVHGASLDEIHAWKDKNLYDVIVDGTSAREQPLILMITTAG
TVRESVYDMKYEEAERLLLSLDDEKEYTDPTFLPIIYELDSRKEWTDPKCWKKANPGLGTIKKIDNLQTKVNKAQANPLL
VKNLLTKDFNVRETSSEAWLTFEQLNNKQTFDVMELKPNYGIGGTDLSETTDLTAAKVIFMLPNDINVYVLQMYWLPEEL
LEQRSKEDKIPYDLWHEAGYLRTTPGNSIHPKFVTEWFLEIRDEYGIYLPWIGYDRWSAKYWVEEMQGYFGKEAMVPVAQ
GKQTLSMPMKLLGADLEAKRIIYNNNPIDKWCLSNTAIDIDKNLNIQPDKTNNQRRRIDGTAALLDAYVVLQEKKNDYLN
MI

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 64731; Mature: 64731

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVQYPLSYNPIIEYYNKIESGEEIVGYKVKRIYKKLVDDIYDQDSIYEYNPKRANHAME
CEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHH
FIENFCKHSKGKWAGKPIDLELWQKAFIGSLFGFIHKIDGTRKYREALLIVARKNGKSTL
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEEECCCCCHH
SSGICLYLQIADGEGGAEVYAVATKEKQAKIVWSEAKRMVKKSPVLSKRIKALVKELNAD
CCCCEEEEEEECCCCCCEEEEEEECCCCHHEEHHHHHHHHHHCCHHHHHHHHHHHHHCCC
FNDSTFQPVGSDSDTLDGLNVHGASLDEIHAWKDKNLYDVIVDGTSAREQPLILMITTAG
CCCCCCCCCCCCCCCCCCCEECCCCHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCC
TVRESVYDMKYEEAERLLLSLDDEKEYTDPTFLPIIYELDSRKEWTDPKCWKKANPGLGT
HHHHHHHHCCHHHHHHHEEECCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCH
IKKIDNLQTKVNKAQANPLLVKNLLTKDFNVRETSSEAWLTFEQLNNKQTFDVMELKPNY
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCEEEHHHCCCCCCEEEEEECCCC
GIGGTDLSETTDLTAAKVIFMLPNDINVYVLQMYWLPEELLEQRSKEDKIPYDLWHEAGY
CCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCHHHHHHCCCCCCCCHHHHHCCCC
LRTTPGNSIHPKFVTEWFLEIRDEYGIYLPWIGYDRWSAKYWVEEMQGYFGKEAMVPVAQ
EEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHC
GKQTLSMPMKLLGADLEAKRIIYNNNPIDKWCLSNTAIDIDKNLNIQPDKTNNQRRRIDG
CCHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCEEEECCCCCCCCCCCCCCHHHCCH
TAALLDAYVVLQEKKNDYLNMI
HHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRVQYPLSYNPIIEYYNKIESGEEIVGYKVKRIYKKLVDDIYDQDSIYEYNPKRANHAME
CEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHH
FIENFCKHSKGKWAGKPIDLELWQKAFIGSLFGFIHKIDGTRKYREALLIVARKNGKSTL
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEEECCCCCHH
SSGICLYLQIADGEGGAEVYAVATKEKQAKIVWSEAKRMVKKSPVLSKRIKALVKELNAD
CCCCEEEEEEECCCCCCEEEEEEECCCCHHEEHHHHHHHHHHCCHHHHHHHHHHHHHCCC
FNDSTFQPVGSDSDTLDGLNVHGASLDEIHAWKDKNLYDVIVDGTSAREQPLILMITTAG
CCCCCCCCCCCCCCCCCCCEECCCCHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCC
TVRESVYDMKYEEAERLLLSLDDEKEYTDPTFLPIIYELDSRKEWTDPKCWKKANPGLGT
HHHHHHHHCCHHHHHHHEEECCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCCH
IKKIDNLQTKVNKAQANPLLVKNLLTKDFNVRETSSEAWLTFEQLNNKQTFDVMELKPNY
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCEEEHHHCCCCCCEEEEEECCCC
GIGGTDLSETTDLTAAKVIFMLPNDINVYVLQMYWLPEELLEQRSKEDKIPYDLWHEAGY
CCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCHHHHHHCCCCCCCCHHHHHCCCC
LRTTPGNSIHPKFVTEWFLEIRDEYGIYLPWIGYDRWSAKYWVEEMQGYFGKEAMVPVAQ
EEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHC
GKQTLSMPMKLLGADLEAKRIIYNNNPIDKWCLSNTAIDIDKNLNIQPDKTNNQRRRIDG
CCHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCEEEECCCCCCCCCCCCCCHHHCCH
TAALLDAYVVLQEKKNDYLNMI
HHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]