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The map label for this gene is ycfX [C]

Identifier: 49183412

GI number: 49183412

Start: 416934

End: 417812

Strand: Direct

Name: ycfX [C]

Synonym: BAS0384

Alternate gene names: 49183412

Gene position: 416934-417812 (Clockwise)

Preceding gene: 49183410

Following gene: 49183413

Centisome position: 7.97

GC content: 35.04

Gene sequence:

>879_bases
ATGAAAGAATATATTGCATTTGATATTGGTGGTACACAAATTAAATATGGAATTGTTTCAGAAACAGGAATAGTACTAAA
GCACAAAACAGTTCCAACAGAAATTCATTTGGGCGGGGAACAAATTATTCAAAAACTCATTCTTTTATCAAAAAAATTAA
TGAGTGAACATACGATTTCGGGAATTGGTATTAGTACTGCGGGAATTGTTGACGTTAATAGAGGGGTTGTGACGGGAGGG
GCGGATCATATTCCGGGCTATAGTACGATTCCTATTATTAATAGATTGCAAGAGGTATTAAAAGTTCCCGTATCTATTGA
AAATGATGTGAATTGTGCTGCGCTGGGAGAAAAGTGGAATGGTATTGGAAGAGAGAAAGAAAATTTCATTATGCTCACCC
TTGGAACTGGTATTGGAGGAGCGATTTTTATAGATAGAGAGTTATATAGAGGGCATTCATATAGTGCTGGTGAATGGGGA
AACATGTTAATAGAAGGAAAAACGTTTGAAGAGGTCGCTTCCATTTCAGGGTTAATTCATCTTGTACGAAATTATAAAGG
AAAAGGTAATTGGAATGGGAAAACGATTTTCGAACTGTATGATAAAGGCGACAGGGAAGTTACGCAAGCAGTTGAGGTTT
TCTTTAAACATTTAGCGATTGGAATTAGTAACCTTGCTTATATTTTTAATCCAGAAACAATTATTATTGGTGGAGGAATT
ACTGATAGAGGAAATCAGTTTTTAAAAGAAGTAAAAGAAGAGGTAGGAAGATACTTAAATAAAGAGATTTATAGTGATTG
TGAGATTGAACTTGCGCAAAACGGTAATCGTGCAGGAATGATTGGTGCTATTTACCACTTCTTACATCATCATAAGTAA

Upstream 100 bases:

>100_bases
TGGTGTATTTCTAAAGAGAGAAAAGTGTTAGTGTAAATTGTTTATGAATAGTAGAGTGGTGAGAATTTTACACTCATTAC
AGTAGAGGAAGTGAAAGCAG

Downstream 100 bases:

>100_bases
ATTATATGAATGTTTTCATATAACTGAGAATTTATCCTTTTTATCAATAGGTAAATAATGCTACAATATAAGAGAAGAAT
ACAATATTTTCCGCCTTGGA

Product: ROK family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKEYIAFDIGGTQIKYGIVSETGIVLKHKTVPTEIHLGGEQIIQKLILLSKKLMSEHTISGIGISTAGIVDVNRGVVTGG
ADHIPGYSTIPIINRLQEVLKVPVSIENDVNCAALGEKWNGIGREKENFIMLTLGTGIGGAIFIDRELYRGHSYSAGEWG
NMLIEGKTFEEVASISGLIHLVRNYKGKGNWNGKTIFELYDKGDREVTQAVEVFFKHLAIGISNLAYIFNPETIIIGGGI
TDRGNQFLKEVKEEVGRYLNKEIYSDCEIELAQNGNRAGMIGAIYHFLHHHK

Sequences:

>Translated_292_residues
MKEYIAFDIGGTQIKYGIVSETGIVLKHKTVPTEIHLGGEQIIQKLILLSKKLMSEHTISGIGISTAGIVDVNRGVVTGG
ADHIPGYSTIPIINRLQEVLKVPVSIENDVNCAALGEKWNGIGREKENFIMLTLGTGIGGAIFIDRELYRGHSYSAGEWG
NMLIEGKTFEEVASISGLIHLVRNYKGKGNWNGKTIFELYDKGDREVTQAVEVFFKHLAIGISNLAYIFNPETIIIGGGI
TDRGNQFLKEVKEEVGRYLNKEIYSDCEIELAQNGNRAGMIGAIYHFLHHHK
>Mature_292_residues
MKEYIAFDIGGTQIKYGIVSETGIVLKHKTVPTEIHLGGEQIIQKLILLSKKLMSEHTISGIGISTAGIVDVNRGVVTGG
ADHIPGYSTIPIINRLQEVLKVPVSIENDVNCAALGEKWNGIGREKENFIMLTLGTGIGGAIFIDRELYRGHSYSAGEWG
NMLIEGKTFEEVASISGLIHLVRNYKGKGNWNGKTIFELYDKGDREVTQAVEVFFKHLAIGISNLAYIFNPETIIIGGGI
TDRGNQFLKEVKEEVGRYLNKEIYSDCEIELAQNGNRAGMIGAIYHFLHHHK

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Homo sapiens, GI190014632, Length=167, Percent_Identity=35.3293413173653, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI298566315, Length=167, Percent_Identity=35.3293413173653, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI298566325, Length=167, Percent_Identity=35.3293413173653, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI4885285, Length=167, Percent_Identity=35.3293413173653, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1787363, Length=305, Percent_Identity=27.8688524590164, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI87081733, Length=304, Percent_Identity=22.6973684210526, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 32198; Mature: 32198

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEYIAFDIGGTQIKYGIVSETGIVLKHKTVPTEIHLGGEQIIQKLILLSKKLMSEHTIS
CCCEEEEECCCCEEEEEEECCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCC
GIGISTAGIVDVNRGVVTGGADHIPGYSTIPIINRLQEVLKVPVSIENDVNCAALGEKWN
CCCCCCCCEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHC
GIGREKENFIMLTLGTGIGGAIFIDRELYRGHSYSAGEWGNMLIEGKTFEEVASISGLIH
CCCCCCCCEEEEEECCCCCCEEEEEHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHH
LVRNYKGKGNWNGKTIFELYDKGDREVTQAVEVFFKHLAIGISNLAYIFNPETIIIGGGI
HHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEECCC
TDRGNQFLKEVKEEVGRYLNKEIYSDCEIELAQNGNRAGMIGAIYHFLHHHK
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKEYIAFDIGGTQIKYGIVSETGIVLKHKTVPTEIHLGGEQIIQKLILLSKKLMSEHTIS
CCCEEEEECCCCEEEEEEECCCCEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHCCC
GIGISTAGIVDVNRGVVTGGADHIPGYSTIPIINRLQEVLKVPVSIENDVNCAALGEKWN
CCCCCCCCEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHC
GIGREKENFIMLTLGTGIGGAIFIDRELYRGHSYSAGEWGNMLIEGKTFEEVASISGLIH
CCCCCCCCEEEEEECCCCCCEEEEEHHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHH
LVRNYKGKGNWNGKTIFELYDKGDREVTQAVEVFFKHLAIGISNLAYIFNPETIIIGGGI
HHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEECCC
TDRGNQFLKEVKEEVGRYLNKEIYSDCEIELAQNGNRAGMIGAIYHFLHHHK
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842; 8177218 [H]