Click here to switch to the map view.

The map label for this gene is ahpF [H]

Identifier: 49183357

GI number: 49183357

Start: 354369

End: 355895

Strand: Reverse

Name: ahpF [H]

Synonym: BAS0329

Alternate gene names: 49183357

Gene position: 355895-354369 (Counterclockwise)

Preceding gene: 49183358

Following gene: 49183354

Centisome position: 6.81

GC content: 41.0

Gene sequence:

>1527_bases
ATGATACTAGATGCAGATATAAAAACACAACTATCCCAATACCTTCAGTTAATGGAGAACGATATTTTACTTAAAGTAAG
CGCAGGAAACGACGACGTATCTAAAGATATGTTAGCTCTAGTAGACGAATTAGCTACTATGTCATCTAAGATTACAGTAG
AAAAAGTTGAATTAGAGAGAACACCAAGCTTTAGCGTAAACCGCCCTGGTGAAGACACTGGTGTCGTATTCGCTGGTATT
CCATTAGGACACGAATTTACATCACTAGTGTTAGCTTTACTACAAGTAAGTGGACGCGCTCCAAAAGTTGAACAAAAATT
AATCGATCAAATTAAAAACATTCAAGGCGAATATCATTTTGAATCTTATATCAGCCTAAGTTGTCATAACTGTCCTGATG
TTGTACAAGCTCTTAACGTAATGAGCGTTCTAAACTCTGGTATTACACATACTATGATTGATGGCGCTGCATTCAAAGAG
GAAGTAGAAAGCAAAGACATCATGGCAGTACCAACAGTTTTCCTAAACGGCGAATCTTTCGGAAGCGGTCGTATGACACT
GGAAGAAATTTTAGCTAAAATGGGTAACGGTCCAGATGCATCAGAGCTTTCTGATAAAGATCCATACGATGTTCTTGTTG
TTGGTGGCGGCCCTGCTGGTGCAAGTGCAGCAATTTATGCAGCACGTAAAGGCATCCGCACTGGTATCGTTGCTGAGCGC
TTCGGTGGTCAAGTAATGGATACTATGGGCATTGAGAACTTCATCAGCGTAAAACGCACTGAAGGTCCTAAGCTAGTAGC
AAGCCTTGAAGAGCACGTAAAAGAATACGACATCGATGTAATGAATCTACAACGTGCAAAACGTTTAGAGAAAAAAGAAC
TTATTGAAGTGGAACTTGAAAACGGCGCTATTCTGAAAAGTAAGAGCGTAATCGTTTCAACAGGTGCTCGCTGGCGTAAC
GTTGGCGTACCAGGTGAAGCTGAGTTCAAAAATAAAGGTGTAGCATACTGCCCACACTGTGACGGTCCATTATTCACTGG
AAAAGACGTAGCAGTTATCGGCGGCGGTAACTCTGGTATTGAAGCAGCTATCGACTTAGCAGGTATTGTTAAGCACGTAA
CTGTTCTTGAATTCATGCCAGAATTAAAAGCTGATGCTGTATTACAAGAACGTCTTAACAGCTTACCAAACGTAACTGTT
CTGAAAAACGTTCAAACGAAAGAAATTACTGGTACTGATAAAGTAAACGGTATTTCTTACATCGATCGTGAAACTGAAGA
AGTTCATCACGTTGAATTACAAGGTGTATTCGTACAAATCGGTCTTGTTCCAAACACAGACTGGTTAGGCGAAACAGTTG
AACGCGTTCGCGGTGAAATCGTAACAGACAAGCACGGCGCTACAAACGTACCAGGAGTGTTTGCTGCAGGTGACTGTACA
AATAATCCGTACAAACAAATCATCATCTCTATGGGTTCAGGTGCAAACGCAGCTTTAGGTGCATTTGATTACTTAATCCG
TAACTAA

Upstream 100 bases:

>100_bases
ACAACCCAGGTGAAGTTTGCCCAGCTAAATGGCAAGAGGGTTCTGCTACACTTAAACCAAGCCTTGACCTTGTAGGCAAA
ATCTAAGGAGTTCGATCAAA

Downstream 100 bases:

>100_bases
TATAGACGTGAGTAAAAAAAGCAGGTGCCTTGGCACCTGCTTTTTTATAATCCTAATGTATACACTAAAAACCTCTCATT
CCCATTCTTCTCATAAGCCC

Product: alkyl hydroperoxide reductasesubunit F

Products: NA

Alternate protein names: Alkyl hydroperoxide reductase [H]

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MILDADIKTQLSQYLQLMENDILLKVSAGNDDVSKDMLALVDELATMSSKITVEKVELERTPSFSVNRPGEDTGVVFAGI
PLGHEFTSLVLALLQVSGRAPKVEQKLIDQIKNIQGEYHFESYISLSCHNCPDVVQALNVMSVLNSGITHTMIDGAAFKE
EVESKDIMAVPTVFLNGESFGSGRMTLEEILAKMGNGPDASELSDKDPYDVLVVGGGPAGASAAIYAARKGIRTGIVAER
FGGQVMDTMGIENFISVKRTEGPKLVASLEEHVKEYDIDVMNLQRAKRLEKKELIEVELENGAILKSKSVIVSTGARWRN
VGVPGEAEFKNKGVAYCPHCDGPLFTGKDVAVIGGGNSGIEAAIDLAGIVKHVTVLEFMPELKADAVLQERLNSLPNVTV
LKNVQTKEITGTDKVNGISYIDRETEEVHHVELQGVFVQIGLVPNTDWLGETVERVRGEIVTDKHGATNVPGVFAAGDCT
NNPYKQIIISMGSGANAALGAFDYLIRN

Sequences:

>Translated_508_residues
MILDADIKTQLSQYLQLMENDILLKVSAGNDDVSKDMLALVDELATMSSKITVEKVELERTPSFSVNRPGEDTGVVFAGI
PLGHEFTSLVLALLQVSGRAPKVEQKLIDQIKNIQGEYHFESYISLSCHNCPDVVQALNVMSVLNSGITHTMIDGAAFKE
EVESKDIMAVPTVFLNGESFGSGRMTLEEILAKMGNGPDASELSDKDPYDVLVVGGGPAGASAAIYAARKGIRTGIVAER
FGGQVMDTMGIENFISVKRTEGPKLVASLEEHVKEYDIDVMNLQRAKRLEKKELIEVELENGAILKSKSVIVSTGARWRN
VGVPGEAEFKNKGVAYCPHCDGPLFTGKDVAVIGGGNSGIEAAIDLAGIVKHVTVLEFMPELKADAVLQERLNSLPNVTV
LKNVQTKEITGTDKVNGISYIDRETEEVHHVELQGVFVQIGLVPNTDWLGETVERVRGEIVTDKHGATNVPGVFAAGDCT
NNPYKQIIISMGSGANAALGAFDYLIRN
>Mature_508_residues
MILDADIKTQLSQYLQLMENDILLKVSAGNDDVSKDMLALVDELATMSSKITVEKVELERTPSFSVNRPGEDTGVVFAGI
PLGHEFTSLVLALLQVSGRAPKVEQKLIDQIKNIQGEYHFESYISLSCHNCPDVVQALNVMSVLNSGITHTMIDGAAFKE
EVESKDIMAVPTVFLNGESFGSGRMTLEEILAKMGNGPDASELSDKDPYDVLVVGGGPAGASAAIYAARKGIRTGIVAER
FGGQVMDTMGIENFISVKRTEGPKLVASLEEHVKEYDIDVMNLQRAKRLEKKELIEVELENGAILKSKSVIVSTGARWRN
VGVPGEAEFKNKGVAYCPHCDGPLFTGKDVAVIGGGNSGIEAAIDLAGIVKHVTVLEFMPELKADAVLQERLNSLPNVTV
LKNVQTKEITGTDKVNGISYIDRETEEVHHVELQGVFVQIGLVPNTDWLGETVERVRGEIVTDKHGATNVPGVFAAGDCT
NNPYKQIIISMGSGANAALGAFDYLIRN

Specific function: Transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone [H]

COG id: COG3634

COG function: function code O; Alkyl hydroperoxide reductase, large subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI87081763, Length=517, Percent_Identity=57.0599613152805, Blast_Score=574, Evalue=1e-165,
Organism=Escherichia coli, GI1787114, Length=307, Percent_Identity=33.2247557003257, Blast_Score=149, Evalue=6e-37,
Organism=Saccharomyces cerevisiae, GI6321898, Length=327, Percent_Identity=32.1100917431193, Blast_Score=138, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6320560, Length=320, Percent_Identity=32.1875, Blast_Score=130, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012081
- InterPro:   IPR013027
- InterPro:   IPR002109
- InterPro:   IPR008255
- InterPro:   IPR001327
- InterPro:   IPR000103
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.6.99.3 [H]

Molecular weight: Translated: 54811; Mature: 54811

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00573 PYRIDINE_REDOX_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDADIKTQLSQYLQLMENDILLKVSAGNDDVSKDMLALVDELATMSSKITVEKVELER
CEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECC
TPSFSVNRPGEDTGVVFAGIPLGHEFTSLVLALLQVSGRAPKVEQKLIDQIKNIQGEYHF
CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEE
ESYISLSCHNCPDVVQALNVMSVLNSGITHTMIDGAAFKEEVESKDIMAVPTVFLNGESF
EEEEEEECCCCHHHHHHHHHHHHHHCCCCEEHCCCHHHHHHHCCCCEEEECEEEECCCCC
GSGRMTLEEILAKMGNGPDASELSDKDPYDVLVVGGGPAGASAAIYAARKGIRTGIVAER
CCCCCHHHHHHHHHCCCCCHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHH
FGGQVMDTMGIENFISVKRTEGPKLVASLEEHVKEYDIDVMNLQRAKRLEKKELIEVELE
HCCHHHHHHCHHHHHHEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHEEEEEEC
NGAILKSKSVIVSTGARWRNVGVPGEAEFKNKGVAYCPHCDGPLFTGKDVAVIGGGNSGI
CCEEEECCCEEEECCCCEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCH
EAAIDLAGIVKHVTVLEFMPELKADAVLQERLNSLPNVTVLKNVQTKEITGTDKVNGISY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHH
IDRETEEVHHVELQGVFVQIGLVPNTDWLGETVERVRGEIVTDKHGATNVPGVFAAGDCT
HCCCHHHHHEEEEEEEEEEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCEEEECCCC
NNPYKQIIISMGSGANAALGAFDYLIRN
CCCHHEEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MILDADIKTQLSQYLQLMENDILLKVSAGNDDVSKDMLALVDELATMSSKITVEKVELER
CEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECC
TPSFSVNRPGEDTGVVFAGIPLGHEFTSLVLALLQVSGRAPKVEQKLIDQIKNIQGEYHF
CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEE
ESYISLSCHNCPDVVQALNVMSVLNSGITHTMIDGAAFKEEVESKDIMAVPTVFLNGESF
EEEEEEECCCCHHHHHHHHHHHHHHCCCCEEHCCCHHHHHHHCCCCEEEECEEEECCCCC
GSGRMTLEEILAKMGNGPDASELSDKDPYDVLVVGGGPAGASAAIYAARKGIRTGIVAER
CCCCCHHHHHHHHHCCCCCHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHH
FGGQVMDTMGIENFISVKRTEGPKLVASLEEHVKEYDIDVMNLQRAKRLEKKELIEVELE
HCCHHHHHHCHHHHHHEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHEEEEEEC
NGAILKSKSVIVSTGARWRNVGVPGEAEFKNKGVAYCPHCDGPLFTGKDVAVIGGGNSGI
CCEEEECCCEEEECCCCEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCH
EAAIDLAGIVKHVTVLEFMPELKADAVLQERLNSLPNVTVLKNVQTKEITGTDKVNGISY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHH
IDRETEEVHHVELQGVFVQIGLVPNTDWLGETVERVRGEIVTDKHGATNVPGVFAAGDCT
HCCCHHHHHEEEEEEEEEEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCEEEECCCC
NNPYKQIIISMGSGANAALGAFDYLIRN
CCCHHEEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1917890; 2760020 [H]