Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is yxkH [H]
Identifier: 49183343
GI number: 49183343
Start: 338292
End: 339374
Strand: Reverse
Name: yxkH [H]
Synonym: BAS0315
Alternate gene names: 49183343
Gene position: 339374-338292 (Counterclockwise)
Preceding gene: 49183344
Following gene: 49183342
Centisome position: 6.49
GC content: 35.27
Gene sequence:
>1083_bases ATGAGAAAATACGCAGCAATCGCTTTATGTACATCTGCCATTCTAGCAGGCTGTAATACTAGCAATGTAAGCCAGGAACC TAACAAAGAGAGAAAGGTTCAAGAAACTAAGAAACAAGCAGAGACTGTGCAAGAACAAGGTAAAATTTCTTATAACCCAA TTACACACGAATCTACAAATACTACTATTCATATGACAGATATAAAAGATACTTTAACTGAGGTACAATATAAAATTTGG CGTACCGCTGATGGAAAGGAAACTGCTAAATCTTTGTCTTCTAAAGAAAAGGAAAAGCAATTTTCACTTCCTTTTGACAC AAAAGAATTTGAAGGAAAACGCGGTGAGTTCCAAATTGAAGCAATAGGCATAAAAGAAGATGGGAAAACCATTCCACTCA CAAAATCTGCTATTACTTTCGAGCAAAAGGTTCCCGTTCTTATGTACCATGCAATCGATGATTATCACGGTCAAGGTATT AAAGACTTATTCGTATCACCCGCTAACTTTGAAGCTCAAATGAAATATTTAAAGGACAATGGTTATACACTGTTAACGTT TGAACGCTGGGGCGATATAAATAAAGTAAATAAACCTATCTTTGTTACATTTGATGATGGTATGAAAAATAATATGAATG CATTTCATGTTTTACAAAAGCTAAAAGACGATACGTTTAAACCGGTGGCAACAGAATATATGATTGTTAATAATGTTGAT GCTGAAGGATCTCTTTCTACATCTGACATAAAAGAAATGGTGGATTCCGGCATTTTCTCTATGCAATCTCATACTGCAAC ACATGCGGACTTGCCGAAGATTACAAACTATGAAGAAGAATTAAAGGAATCGAAAGAAAAGCTAGAAAAAATAACAGGTA AACCCGTTATCGCAGTTGCCTATCCATTCGGTCACGTAGATGATAAAGTCGTTGCAGAAACGAAAAAATATTATCAATTC GCAACAACAACAAAACCTGGAAAATTCATTACAAAAGGTGAACCCGATGAGTTGTTAAAAATGAAGCGTGTTCGCATACA CCATACGACGACCGTAGAACAATTTGCTTCTTCGATTAAATAA
Upstream 100 bases:
>100_bases TAAAATGACATGATGAACAAGGGTATATCCCCACCTCTCTTACAGCGGTGGGGATTTTAAATAGAAGTACGAAACATAAT ACACAATAGAAGGTGATTTT
Downstream 100 bases:
>100_bases CGATGAGAGCTCAATATATTTTGAGCTCTCTTTTTATGCTATATTTATATATATTTTTTGAATTTTCTTGTATTATATAT AGTAAGAAATCTTTCAAATT
Product: polysaccharide deacetylase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTNTTIHMTDIKDTLTEVQYKIW RTADGKETAKSLSSKEKEKQFSLPFDTKEFEGKRGEFQIEAIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGI KDLFVSPANFEAQMKYLKDNGYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPVATEYMIVNNVD AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVAYPFGHVDDKVVAETKKYYQF ATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK
Sequences:
>Translated_360_residues MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTNTTIHMTDIKDTLTEVQYKIW RTADGKETAKSLSSKEKEKQFSLPFDTKEFEGKRGEFQIEAIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGI KDLFVSPANFEAQMKYLKDNGYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPVATEYMIVNNVD AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVAYPFGHVDDKVVAETKKYYQF ATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK >Mature_360_residues MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTNTTIHMTDIKDTLTEVQYKIW RTADGKETAKSLSSKEKEKQFSLPFDTKEFEGKRGEFQIEAIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGI KDLFVSPANFEAQMKYLKDNGYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPVATEYMIVNNVD AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVAYPFGHVDDKVVAETKKYYQF ATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide deacetylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011330 - InterPro: IPR002509 [H]
Pfam domain/function: PF01522 Polysacc_deac_1 [H]
EC number: NA
Molecular weight: Translated: 40792; Mature: 40792
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTN CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC TTIHMTDIKDTLTEVQYKIWRTADGKETAKSLSSKEKEKQFSLPFDTKEFEGKRGEFQIE CEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEE AIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGIKDLFVSPANFEAQMKYLKDN EEEEECCCCCCCCCHHHEEHHCCCCEEEEEEHHHHCCCCHHHHHCCCCCHHHHHHEEECC GYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPVATEYMIVNNVD CCEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCC AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE YPFGHVDDKVVAETKKYYQFATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK ECCCCCCCHHHHHHHHHHEEECCCCCCCEEECCCHHHHHHHHHHHEECHHHHHHHHHHCC >Mature Secondary Structure MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTN CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC TTIHMTDIKDTLTEVQYKIWRTADGKETAKSLSSKEKEKQFSLPFDTKEFEGKRGEFQIE CEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEE AIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGIKDLFVSPANFEAQMKYLKDN EEEEECCCCCCCCCHHHEEHHCCCCEEEEEEHHHHCCCCHHHHHCCCCCHHHHHHEEECC GYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPVATEYMIVNNVD CCEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCC AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE YPFGHVDDKVVAETKKYYQFATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK ECCCCCCCHHHHHHHHHHEEECCCCCCCEEECCCHHHHHHHHHHHEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]