Click here to switch to the map view.

The map label for this gene is yddQ [H]

Identifier: 49183324

GI number: 49183324

Start: 319812

End: 320375

Strand: Reverse

Name: yddQ [H]

Synonym: BAS0296

Alternate gene names: 49183324

Gene position: 320375-319812 (Counterclockwise)

Preceding gene: 49183328

Following gene: 49183317

Centisome position: 6.13

GC content: 36.52

Gene sequence:

>564_bases
ATGAAAACAGCTCTTTTACTCGTTGATATTCAAAATGATTATTTTCCACACGGAAAGATGGAATTACGTAATCCAGCAGA
AGCAAGCGCATATGCCAGCCAACTACTACAGCTCTTTAGAAAGAAAAACGAACCTATTTTTCATATCCAACATATATCAA
TAAAAGAGGACGCAACTTTTTTCCTACCCAATACAGAAGGTGTACATATTCATGAAAGCGTACGCCCACTTAGAGAAGAA
TCAGTTATACTCAAGCATTATCCAAATAGTTTTCGCGAAACTGATCTTCTAAAACAATTACAACGTTTAGCTATTGAGCA
CGTCGTCATATGCGGGATGATGACTCATATGTGTATTGATGCTACCGTAAGGGCTGCCTTTGATTTCGGCTTGCAATGTA
CTGTTATACATGATGCTTGTGCTACAAAAGACCTTTCTTTTAAGAATGCTACTATACCAGCCGTTTATATTCATAACACA
ATTTTAGCTAGTTTAAACGGCGTATATGCAAATGTAATGAGTACAGAGGAGTTTTTAGCTACAAAAAAACACTCTCTTCA
GTGA

Upstream 100 bases:

>100_bases
AGTTATGTAAAATTCTCCTCTTGCATATTTTTTAAAAGGATAATCTTCTCTACTAATTGAATACCATTATTTGAATATGA
AATTGGAGGAAGATAAATAT

Downstream 100 bases:

>100_bases
GCAAAACCGAAAAGAGTGTTTCTTGTCAAACCATAGATTTTCTTTCAAATTGTATTATACAGGAAATCCTTAAAATGAAT
ACAAAAAAATGTGACTAATA

Product: isochorismatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKTALLLVDIQNDYFPHGKMELRNPAEASAYASQLLQLFRKKNEPIFHIQHISIKEDATFFLPNTEGVHIHESVRPLREE
SVILKHYPNSFRETDLLKQLQRLAIEHVVICGMMTHMCIDATVRAAFDFGLQCTVIHDACATKDLSFKNATIPAVYIHNT
ILASLNGVYANVMSTEEFLATKKHSLQ

Sequences:

>Translated_187_residues
MKTALLLVDIQNDYFPHGKMELRNPAEASAYASQLLQLFRKKNEPIFHIQHISIKEDATFFLPNTEGVHIHESVRPLREE
SVILKHYPNSFRETDLLKQLQRLAIEHVVICGMMTHMCIDATVRAAFDFGLQCTVIHDACATKDLSFKNATIPAVYIHNT
ILASLNGVYANVMSTEEFLATKKHSLQ
>Mature_187_residues
MKTALLLVDIQNDYFPHGKMELRNPAEASAYASQLLQLFRKKNEPIFHIQHISIKEDATFFLPNTEGVHIHESVRPLREE
SVILKHYPNSFRETDLLKQLQRLAIEHVVICGMMTHMCIDATVRAAFDFGLQCTVIHDACATKDLSFKNATIPAVYIHNT
ILASLNGVYANVMSTEEFLATKKHSLQ

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 21235; Mature: 21235

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTALLLVDIQNDYFPHGKMELRNPAEASAYASQLLQLFRKKNEPIFHIQHISIKEDATF
CCEEEEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEE
FLPNTEGVHIHESVRPLREESVILKHYPNSFRETDLLKQLQRLAIEHVVICGMMTHMCID
EECCCCCEEEHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATVRAAFDFGLQCTVIHDACATKDLSFKNATIPAVYIHNTILASLNGVYANVMSTEEFLA
HHHHHHHHCCCEEEEEEHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
TKKHSLQ
HHHHCCC
>Mature Secondary Structure
MKTALLLVDIQNDYFPHGKMELRNPAEASAYASQLLQLFRKKNEPIFHIQHISIKEDATF
CCEEEEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEE
FLPNTEGVHIHESVRPLREESVILKHYPNSFRETDLLKQLQRLAIEHVVICGMMTHMCID
EECCCCCEEEHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATVRAAFDFGLQCTVIHDACATKDLSFKNATIPAVYIHNTILASLNGVYANVMSTEEFLA
HHHHHHHHCCCEEEEEEHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
TKKHSLQ
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]