Click here to switch to the map view.

The map label for this gene is yfcA [C]

Identifier: 49183322

GI number: 49183322

Start: 316774

End: 317544

Strand: Direct

Name: yfcA [C]

Synonym: BAS0294

Alternate gene names: 49183322

Gene position: 316774-317544 (Clockwise)

Preceding gene: 49183321

Following gene: 49183323

Centisome position: 6.06

GC content: 32.94

Gene sequence:

>771_bases
ATGGATGAATTAAGTTTTCAAGTCATTATTTTATTAATTGCATTCGGTTTTTTAGCAGCTTTTATTGATTCAGTTGTTGG
TGGTGGAGGATTAATTTCGCTTCCGGCGCTTATGTTTGTTGGTTTACCACCAGCTTCGGCAATTGCAACGAATAAATTAG
CTGCAACGATGGGGACGTTTACGAGTGCGATTTACTTTATTCGATCGGGAAAGGTCGATTTTAAAATTGTAGGAAAGTTA
ATCCCGTTAACTGTTATAGGAGCAGTAGCAGGTGCTTTAGTAGTAAAGTTTATTCCGCCGGATATTTTACGTCCGTTAGT
GCTTGTAATGTTGGTGTTTATTGCTATTTATATTATTGCGAAAAAGGATTGGGGAAGTGTCTCTACCTATAAGAAGATGA
CGAAAAGAAAAACATTAATATTTTTCTTTGTTATTTTAATGATAGGGTTTTACGATGGATTTTTTGGACCAGGAACAGGA
TCCTTTTTAATTTTTGCATTTTTATTAATTGGTTTGGATTTTATTCAAGCGGCAGCATCTGGAAAACTTTTGAATTTTGT
TAGTAATATCGTATCGTTAATCACTTTTTTATTTTTAGACGTAATTCATTTTGAATACGGTATTATTATGGGGTTATCGA
TGATTTTTGGCGCTTATTTTGGATCGAAGTTTGCAGTTCAAAAAGGTGTTGGATATGTAAGAGCTTTATTTTTGTTAGTG
ACTATTTTATTGATTAGCAAAAACGTTTTGGAATATACTCATATTTTGTAG

Upstream 100 bases:

>100_bases
ATTAAGTAGAAGGGCCGTTCCTTTATGGAACGGCTTTTTTTCTTGGGTAATTTTGTTATAATTTAAAATGTTATAAATAA
TGGGGTAAGGGGTAAAGGGC

Downstream 100 bases:

>100_bases
AGTTATACATTTGTATAACTCTGTTTTTTTATTATATTTTAAAAATTAATTAATTTTTAAAATATAAGTCTAGGAATATT
TGAATAAATCTAAATTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF9 [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MDELSFQVIILLIAFGFLAAFIDSVVGGGGLISLPALMFVGLPPASAIATNKLAATMGTFTSAIYFIRSGKVDFKIVGKL
IPLTVIGAVAGALVVKFIPPDILRPLVLVMLVFIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTG
SFLIFAFLLIGLDFIQAAASGKLLNFVSNIVSLITFLFLDVIHFEYGIIMGLSMIFGAYFGSKFAVQKGVGYVRALFLLV
TILLISKNVLEYTHIL

Sequences:

>Translated_256_residues
MDELSFQVIILLIAFGFLAAFIDSVVGGGGLISLPALMFVGLPPASAIATNKLAATMGTFTSAIYFIRSGKVDFKIVGKL
IPLTVIGAVAGALVVKFIPPDILRPLVLVMLVFIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTG
SFLIFAFLLIGLDFIQAAASGKLLNFVSNIVSLITFLFLDVIHFEYGIIMGLSMIFGAYFGSKFAVQKGVGYVRALFLLV
TILLISKNVLEYTHIL
>Mature_256_residues
MDELSFQVIILLIAFGFLAAFIDSVVGGGGLISLPALMFVGLPPASAIATNKLAATMGTFTSAIYFIRSGKVDFKIVGKL
IPLTVIGAVAGALVVKFIPPDILRPLVLVMLVFIAIYIIAKKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTG
SFLIFAFLLIGLDFIQAAASGKLLNFVSNIVSLITFLFLDVIHFEYGIIMGLSMIFGAYFGSKFAVQKGVGYVRALFLLV
TILLISKNVLEYTHIL

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=233, Percent_Identity=36.9098712446352, Blast_Score=144, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27799; Mature: 27799

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDELSFQVIILLIAFGFLAAFIDSVVGGGGLISLPALMFVGLPPASAIATNKLAATMGTF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TSAIYFIRSGKVDFKIVGKLIPLTVIGAVAGALVVKFIPPDILRPLVLVMLVFIAIYIIA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
KKDWGSVSTYKKMTKRKTLIFFFVILMIGFYDGFFGPGTGSFLIFAFLLIGLDFIQAAAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GKLLNFVSNIVSLITFLFLDVIHFEYGIIMGLSMIFGAYFGSKFAVQKGVGYVRALFLLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TILLISKNVLEYTHIL
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]