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The map label for this gene is uvsE [H]

Identifier: 49183267

GI number: 49183267

Start: 236517

End: 237479

Strand: Direct

Name: uvsE [H]

Synonym: BAS0234

Alternate gene names: 49183267

Gene position: 236517-237479 (Clockwise)

Preceding gene: 49183266

Following gene: 49183269

Centisome position: 4.52

GC content: 35.41

Gene sequence:

>963_bases
ATGCTTGTAAGGCTTGGGCATGTCGCGATGAGTGTACATTTGAAAAATGCATCTCCATCTCAAACGATGACGTACGCACA
GTTTCAAAAAATAGATGATCGGGAAGCGGCAATTCGTAAACTTGAAAGAATTGCTAATTCGAATTTGGAAAATTGCTTAC
GGTTATTAAAACATAATAAAGGCCATGATATATCCTTTTTTCGACTTAGTTCTAAGTTGATTCCTTTAGCGAATCATGAG
GAGTTGTTAGAGTGGAATTATATTCGCCCTTTAAAAGAAAATTTAAAAGTGCTAGGTGATTACGCTATTCGAATGAATAT
GCGTATTGATTTTCATCCAGATCATTTTGTTGTACTCAATTCACCTGAGGAGAATATTTTTAAACAATCTGTAAAGACGT
TACAGATGCATAGAAAATTATTAAAAGGTATGGGGATTGAACATAAGCAACGATGTGTAATGCATGTTGGGGGCGGATAT
AAAGATAAAGAGCTTGCATTAGAGCGTTTTATAGAGAATTGGTCTAATGTCCCAAGAGGTATTCAGGAAATGATTATGTT
AGAAAATGATGATACAACTTTTACGCTCGAGGATACATTATATTTAGGAGAAAAACTGGACATTCCCGTTGTATTTGATT
TACATCACCATATGATGAATCATGATCGAGAAGATTGGCATGAAGATTGGGCGCGTGTTGTACATACGTGGGAATCGTCT
TTGTTACCAGTGAAAATGCACATTTCTAGTCCTAGAGAGGGAAAAGACCCGAGAGCACATGCGGACTTTATTGATGTAGA
TACTTTTTTATCTTTTTTAAAAAAGATAAAGGGAAGTGTTCCGCAAATTGATTGTATGATTGAAGCGAAGATGAAGGATG
AGTCTTTATTTCAACTTATGAGGGATTTAAGTGAACAAACAGATGTGGAAATTATCGATGGTGCGAGCTTTTATATTAAA
TGA

Upstream 100 bases:

>100_bases
TTAATAATAAAAAAAGAGAATGCCCTTTGCCGGCATTCTCTTTTTTTATTTCTGTAATTGTACATACTACATAATAACTT
GTGTAGAAATGAGGTGCCAC

Downstream 100 bases:

>100_bases
GCTCTGCACCATCGAGTTTTTTTATTAATAAAGGGGTGCAAATACCACCAATGACCAATCCTGTTAAATGGCTGATAGGG
TTGGCAGAGGGATTGAAGAA

Product: putative UV damage endonuclease

Products: NA

Alternate protein names: UV-endonuclease; UVED [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLVRLGHVAMSVHLKNASPSQTMTYAQFQKIDDREAAIRKLERIANSNLENCLRLLKHNKGHDISFFRLSSKLIPLANHE
ELLEWNYIRPLKENLKVLGDYAIRMNMRIDFHPDHFVVLNSPEENIFKQSVKTLQMHRKLLKGMGIEHKQRCVMHVGGGY
KDKELALERFIENWSNVPRGIQEMIMLENDDTTFTLEDTLYLGEKLDIPVVFDLHHHMMNHDREDWHEDWARVVHTWESS
LLPVKMHISSPREGKDPRAHADFIDVDTFLSFLKKIKGSVPQIDCMIEAKMKDESLFQLMRDLSEQTDVEIIDGASFYIK

Sequences:

>Translated_320_residues
MLVRLGHVAMSVHLKNASPSQTMTYAQFQKIDDREAAIRKLERIANSNLENCLRLLKHNKGHDISFFRLSSKLIPLANHE
ELLEWNYIRPLKENLKVLGDYAIRMNMRIDFHPDHFVVLNSPEENIFKQSVKTLQMHRKLLKGMGIEHKQRCVMHVGGGY
KDKELALERFIENWSNVPRGIQEMIMLENDDTTFTLEDTLYLGEKLDIPVVFDLHHHMMNHDREDWHEDWARVVHTWESS
LLPVKMHISSPREGKDPRAHADFIDVDTFLSFLKKIKGSVPQIDCMIEAKMKDESLFQLMRDLSEQTDVEIIDGASFYIK
>Mature_320_residues
MLVRLGHVAMSVHLKNASPSQTMTYAQFQKIDDREAAIRKLERIANSNLENCLRLLKHNKGHDISFFRLSSKLIPLANHE
ELLEWNYIRPLKENLKVLGDYAIRMNMRIDFHPDHFVVLNSPEENIFKQSVKTLQMHRKLLKGMGIEHKQRCVMHVGGGY
KDKELALERFIENWSNVPRGIQEMIMLENDDTTFTLEDTLYLGEKLDIPVVFDLHHHMMNHDREDWHEDWARVVHTWESS
LLPVKMHISSPREGKDPRAHADFIDVDTFLSFLKKIKGSVPQIDCMIEAKMKDESLFQLMRDLSEQTDVEIIDGASFYIK

Specific function: Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion [H]

COG id: COG4294

COG function: function code L; UV damage repair endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uve1/uvsE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004601 [H]

Pfam domain/function: PF03851 UvdE [H]

EC number: NA

Molecular weight: Translated: 37442; Mature: 37442

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVRLGHVAMSVHLKNASPSQTMTYAQFQKIDDREAAIRKLERIANSNLENCLRLLKHNK
CEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCC
GHDISFFRLSSKLIPLANHEELLEWNYIRPLKENLKVLGDYAIRMNMRIDFHPDHFVVLN
CCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCEEEEEEEEEEECCCEEEEEC
SPEENIFKQSVKTLQMHRKLLKGMGIEHKQRCVMHVGGGYKDKELALERFIENWSNVPRG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHCCCHH
IQEMIMLENDDTTFTLEDTLYLGEKLDIPVVFDLHHHMMNHDREDWHEDWARVVHTWESS
HHHHHEEECCCCEEEEEEEEEECCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHCC
LLPVKMHISSPREGKDPRAHADFIDVDTFLSFLKKIKGSVPQIDCMIEAKMKDESLFQLM
CCEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHH
RDLSEQTDVEIIDGASFYIK
HHHHHCCCEEEEECCEEEEC
>Mature Secondary Structure
MLVRLGHVAMSVHLKNASPSQTMTYAQFQKIDDREAAIRKLERIANSNLENCLRLLKHNK
CEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCC
GHDISFFRLSSKLIPLANHEELLEWNYIRPLKENLKVLGDYAIRMNMRIDFHPDHFVVLN
CCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCEEEEEEEEEEECCCEEEEEC
SPEENIFKQSVKTLQMHRKLLKGMGIEHKQRCVMHVGGGYKDKELALERFIENWSNVPRG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHCCCHH
IQEMIMLENDDTTFTLEDTLYLGEKLDIPVVFDLHHHMMNHDREDWHEDWARVVHTWESS
HHHHHEEECCCCEEEEEEEEEECCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHCC
LLPVKMHISSPREGKDPRAHADFIDVDTFLSFLKKIKGSVPQIDCMIEAKMKDESLFQLM
CCEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHH
RDLSEQTDVEIIDGASFYIK
HHHHHCCCEEEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]