Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is czcR [H]
Identifier: 49183238
GI number: 49183238
Start: 204178
End: 205044
Strand: Reverse
Name: czcR [H]
Synonym: BAS0205
Alternate gene names: 49183238
Gene position: 205044-204178 (Counterclockwise)
Preceding gene: 49183246
Following gene: 49183236
Centisome position: 3.92
GC content: 35.41
Gene sequence:
>867_bases ATGGAATTAAGAGACTTGCAAATCTTCCAGAGCGTTGCCGACCAAGGTAGTGTAAGTAGCGCAGCAAAGGAATTAAATTA CGTACAATCAAATGTAACTGCACGTATTAAACAACTAGAAAACGAGCTAAAAACACCGCTCTTTTATCGTCATAAGCGAG GCATGACTTTAACAGCTGAAGGAAGAAAAATGCTCGTTTATGTTAATAAAATTTTGCAAGATGTTGACGAGCTAAAACAA GTATTTTTAGATAGCGAAACACCCTCTGGCATATTAAAAATCGGTACTGTCGAAACAGTAAGTACATTACCTACCATTTT ATCTTCTTACTATAAAAGCTATCCGAACGTCGATTTGTCATTACAAGCAGGTTTAACAGAAGAATTAATTAGAGAAGTAC TCGATCATCAATTAGATGGCGCTTTTATATCAGGACCAATAAAACATCCACTTATTGAACAATACGATGTTAGTACAGAA AAATTAATGCTTGTAACACAAAATAAAACTTTTCATATTGAAGAATTTACAACAACGCCTCTACTCGTTTTTAATCAAGG ATGTGGATACCGTTCTAAACTAGAACGATGGCTGAAAGATGAAGGTTTGCTTCCAAAAAGAATTATGGAATTCAATATAT TAGAGACACTATTAAACAGTGTTGCACTCGGCCTTGGAATTACACTCGTACCACAGTCTGCTGTCCATCATCTTTCTAAA GCAGGTAAAGTTCATTGCCATGCAATTCCTGAGAAATATGGTAGTATTTCAACGGTTTTCATACGCCGCAAAGATAGCTA TATGACGAATTCAATGCGTAGCTTTTTAAAAACAATCGAAGAGCACCACCACATTAATATGCTTTAA
Upstream 100 bases:
>100_bases ACAAAGAGAATTGTAAAAGAAAAAATATATCACGTAAAATGATTCAAAATGATATTAACTATCATTTATAATGATAGTTA ACATCAAGGAGGACAGTATT
Downstream 100 bases:
>100_bases AAGACATTCTTACACGAATGTCTTTTTTTCTTACAAAAGTGTAAGTCTTCCGTAAGCTAATTCGATAGTTGCAGGCGATC ATATTTCCTATAATTAAGAC
Product: LysR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MELRDLQIFQSVADQGSVSSAAKELNYVQSNVTARIKQLENELKTPLFYRHKRGMTLTAEGRKMLVYVNKILQDVDELKQ VFLDSETPSGILKIGTVETVSTLPTILSSYYKSYPNVDLSLQAGLTEELIREVLDHQLDGAFISGPIKHPLIEQYDVSTE KLMLVTQNKTFHIEEFTTTPLLVFNQGCGYRSKLERWLKDEGLLPKRIMEFNILETLLNSVALGLGITLVPQSAVHHLSK AGKVHCHAIPEKYGSISTVFIRRKDSYMTNSMRSFLKTIEEHHHINML
Sequences:
>Translated_288_residues MELRDLQIFQSVADQGSVSSAAKELNYVQSNVTARIKQLENELKTPLFYRHKRGMTLTAEGRKMLVYVNKILQDVDELKQ VFLDSETPSGILKIGTVETVSTLPTILSSYYKSYPNVDLSLQAGLTEELIREVLDHQLDGAFISGPIKHPLIEQYDVSTE KLMLVTQNKTFHIEEFTTTPLLVFNQGCGYRSKLERWLKDEGLLPKRIMEFNILETLLNSVALGLGITLVPQSAVHHLSK AGKVHCHAIPEKYGSISTVFIRRKDSYMTNSMRSFLKTIEEHHHINML >Mature_288_residues MELRDLQIFQSVADQGSVSSAAKELNYVQSNVTARIKQLENELKTPLFYRHKRGMTLTAEGRKMLVYVNKILQDVDELKQ VFLDSETPSGILKIGTVETVSTLPTILSSYYKSYPNVDLSLQAGLTEELIREVLDHQLDGAFISGPIKHPLIEQYDVSTE KLMLVTQNKTFHIEEFTTTPLLVFNQGCGYRSKLERWLKDEGLLPKRIMEFNILETLLNSVALGLGITLVPQSAVHHLSK AGKVHCHAIPEKYGSISTVFIRRKDSYMTNSMRSFLKTIEEHHHINML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787806, Length=285, Percent_Identity=30.1754385964912, Blast_Score=156, Evalue=1e-39, Organism=Escherichia coli, GI1788481, Length=284, Percent_Identity=25.7042253521127, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI87082132, Length=290, Percent_Identity=24.4827586206897, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI157672245, Length=285, Percent_Identity=26.3157894736842, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788887, Length=298, Percent_Identity=26.510067114094, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1790208, Length=246, Percent_Identity=26.0162601626016, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1787530, Length=297, Percent_Identity=23.9057239057239, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1788296, Length=249, Percent_Identity=26.5060240963855, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI2367136, Length=249, Percent_Identity=26.1044176706827, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI145693105, Length=287, Percent_Identity=24.390243902439, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790399, Length=272, Percent_Identity=25.3676470588235, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788297, Length=252, Percent_Identity=26.1904761904762, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787879, Length=246, Percent_Identity=25.2032520325203, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786401, Length=160, Percent_Identity=30.625, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787601, Length=155, Percent_Identity=25.8064516129032, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789639, Length=137, Percent_Identity=29.1970802919708, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788748, Length=250, Percent_Identity=22.4, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000847 - InterPro: IPR005119 - InterPro: IPR011991 [H]
Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]
EC number: NA
Molecular weight: Translated: 32705; Mature: 32705
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS50931 HTH_LYSR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELRDLQIFQSVADQGSVSSAAKELNYVQSNVTARIKQLENELKTPLFYRHKRGMTLTAE CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEC GRKMLVYVNKILQDVDELKQVFLDSETPSGILKIGTVETVSTLPTILSSYYKSYPNVDLS CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEE LQAGLTEELIREVLDHQLDGAFISGPIKHPLIEQYDVSTEKLMLVTQNKTFHIEEFTTTP ECCCCHHHHHHHHHHHHCCCCEECCCCCCCCHHHHCCCCCEEEEEECCCEEEEEECCCCC LLVFNQGCGYRSKLERWLKDEGLLPKRIMEFNILETLLNSVALGLGITLVPQSAVHHLSK EEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH AGKVHCHAIPEKYGSISTVFIRRKDSYMTNSMRSFLKTIEEHHHINML CCCEEEEECHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MELRDLQIFQSVADQGSVSSAAKELNYVQSNVTARIKQLENELKTPLFYRHKRGMTLTAE CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEC GRKMLVYVNKILQDVDELKQVFLDSETPSGILKIGTVETVSTLPTILSSYYKSYPNVDLS CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEE LQAGLTEELIREVLDHQLDGAFISGPIKHPLIEQYDVSTEKLMLVTQNKTFHIEEFTTTP ECCCCHHHHHHHHHHHHCCCCEECCCCCCCCHHHHCCCCCEEEEEECCCEEEEEECCCCC LLVFNQGCGYRSKLERWLKDEGLLPKRIMEFNILETLLNSVALGLGITLVPQSAVHHLSK EEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHH AGKVHCHAIPEKYGSISTVFIRRKDSYMTNSMRSFLKTIEEHHHINML CCCEEEEECHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA