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The map label for this gene is yhbQ [C]

Identifier: 49183069

GI number: 49183069

Start: 39669

End: 39959

Strand: Direct

Name: yhbQ [C]

Synonym: BAS0034

Alternate gene names: 49183069

Gene position: 39669-39959 (Clockwise)

Preceding gene: 49183068

Following gene: 49183070

Centisome position: 0.76

GC content: 34.02

Gene sequence:

>291_bases
ATGGAGAAGAATAAACATTGTTTTTATGTAGTAGAGTGCTCTGATGGAAGTTATTATGCTGGATATACAAATCATATAGA
GAAAAGGATTGGGACCCATAATAGCGGAAGAGGAGCTAAGTATACGCGCGCTAGACTTCCTGTTGTGTTAAAATACGTAG
AATTTCATGAAGATAAGCGTACAGCTATGCAAGCAGAGTATTATTTTAAGCAATTAAATAGAAAACAAAAAGAAGAATAT
ATGCAAAAAGGAGAACGCTATGTGGCAACAAAAAAGCTTTCAACAAAATGA

Upstream 100 bases:

>100_bases
GAAGGAATTAAAGATGGAAACGCAGATTTAAAAATATTGCCACCTCTTTTTGTATATGAAGAAAATAATGAATATACAAA
GGAGATTCGCTCGATTTTAT

Downstream 100 bases:

>100_bases
AAAGGGAGTTTTATATTTAGTACCAACTCCTATTGGAAATTTAGAAGATATGACATTTCGTGCAATCCGAATTTTAAAAG
AAGCTGATTTAATTGCTGCT

Product: GIY-YIG nuclease superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MEKNKHCFYVVECSDGSYYAGYTNHIEKRIGTHNSGRGAKYTRARLPVVLKYVEFHEDKRTAMQAEYYFKQLNRKQKEEY
MQKGERYVATKKLSTK

Sequences:

>Translated_96_residues
MEKNKHCFYVVECSDGSYYAGYTNHIEKRIGTHNSGRGAKYTRARLPVVLKYVEFHEDKRTAMQAEYYFKQLNRKQKEEY
MQKGERYVATKKLSTK
>Mature_96_residues
MEKNKHCFYVVECSDGSYYAGYTNHIEKRIGTHNSGRGAKYTRARLPVVLKYVEFHEDKRTAMQAEYYFKQLNRKQKEEY
MQKGERYVATKKLSTK

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y031_BACCZ (Q63HH3)

Other databases:

- EMBL:   CP000001
- RefSeq:   YP_081648.1
- HSSP:   Q9KGL3
- ProteinModelPortal:   Q63HH3
- SMR:   Q63HH3
- STRING:   Q63HH3
- EnsemblBacteria:   EBBACT00000044436
- GeneID:   3025061
- GenomeReviews:   CP000001_GR
- KEGG:   bcz:BCZK0031
- eggNOG:   COG2827
- GeneTree:   EBGT00050000002560
- HOGENOM:   HBG678874
- OMA:   EKEATHE
- ProtClustDB:   PRK00329
- BioCyc:   BCER288681:BCE33L0031-MONOMER
- GO:   GO:0005622
- InterPro:   IPR000305

Pfam domain/function: PF01541 GIY-YIG; SSF82771 UvrC_N

EC number: NA

Molecular weight: Translated: 11455; Mature: 11455

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNKHCFYVVECSDGSYYAGYTNHIEKRIGTHNSGRGAKYTRARLPVVLKYVEFHEDKR
CCCCCCEEEEEEECCCCEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
TAMQAEYYFKQLNRKQKEEYMQKGERYVATKKLSTK
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC
>Mature Secondary Structure
MEKNKHCFYVVECSDGSYYAGYTNHIEKRIGTHNSGRGAKYTRARLPVVLKYVEFHEDKR
CCCCCCEEEEEEECCCCEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
TAMQAEYYFKQLNRKQKEEYMQKGERYVATKKLSTK
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA