Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447495

Identifier: 46447495

GI number: 46447495

Start: 2221636

End: 2222838

Strand: Reverse

Name: 46447495

Synonym: pc1861

Alternate gene names: NA

Gene position: 2222838-2221636 (Counterclockwise)

Preceding gene: 46447501

Following gene: 46447489

Centisome position: 92.06

GC content: 37.74

Gene sequence:

>1203_bases
ATGGTTTTTTCTGCGAAACAATCTATTCCATTATCGTTAGCTCCGTTACTGGCTTTGACATGGTTAGCACATTTTTTTAT
TGATACAATGCTAGGAATTTGGCCTGTCTATAAGTCGATGGCTCAATTAGATTTCGCCAAAGCTGGCCTTGTCGTTGCAG
CAGGAGCATTTATTGGGGAAGGAGCTCAATTATTTTTTGGAGCATTTAGTGACAGAGGTTATCGAAAGCATTTAATGATT
TTAGGATTGCTATTAGTGGTTGCTAGTACACTTGTAGTCCAATTTAGCCATTATGGGATTTTATTTTGTCTTTACTTATT
TACCTGTTTAGGTTCAGGTAGCTTTCATCCTGCTGCAGGCAGTTTAATGGGAAGTTTGATTCCAACGAGGCGAGGCTTAT
TAATGGCTATTTTTGCTTCGGGAGGGAGTTTAGGACTTGCTTTTAGCCAACTGATTTTTTTATTTGTGTATAAAAATATG
AATGGACAAACGTATTTACTAGCCATCCCCGCCATTATTTTGAGCTTTTTTTTGATTTTTTATCGTTTTCCCGTGATACA
ATCTGTTCAGCATACTTTAAAGAAGGGTATTTTAAGAGATTTTAAGGCTTTTTTTTGTCATATTCCCTTGCGAATGCTTT
ATTTAGCACAAGTGGCCAATCAATCCATTTTATGGGGGATGATTTTTATTTTACCAGATGCTTTAAAAACCCTAGGTTTA
GCCGAATGGATTTATTATGGAGGAGGGCATCTATGCTTAATTTTGGGAGGAGCATGTATGATGGTGCCAGCTGGCTATTT
AGCTGATAAATACTCTCCTCGGCAAGTCATCTTATACGCTGGGATAGTCAGTTGTGCGACTTTTTATTTTATCTTGTTTT
TTGGAAGTTTTTCTATGTGGCTTTCTCTCCTATTACTTTTTATTTTAGGAGCTTCATTGACGCTTGTGAATCCGATTGGA
ATTGCGCTTGGTGTACGCTATGCACCTGGGCAGGCAGGATCTATCAGTGCTTTTTTAATGGGGATGGTTTGGTGTATATC
TGAAGCAATCGGTCCAGGATCAGTTGGGTTAATGACAGCTTTTTTTGAGAATTATGCACCTATCAAAGCGTTGGCTGTGC
TTGGTTTACTATTCCTCATTCAAATTTATGCAACATTCTCTCTTCCCAAAGAAGAACAAGAATTAGTTTTTTCTCCTTGT
TAA

Upstream 100 bases:

>100_bases
TTTAAAAAAATTTATAATTATTTTATTATATTTATAATATTAATTTAATTTAACTAATAAAAATTGTTGTTATATTCGAT
AAATTTTGAAAAAGGTTTGT

Downstream 100 bases:

>100_bases
ACAAGGTTAAACAATCTTCATTTTTTAACAGCTATTTCAGAAATTTGGTTTAGCTCGATGTGAATGAGGAGTTCCCCATC
GAGCTAAGATGGACTTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MVFSAKQSIPLSLAPLLALTWLAHFFIDTMLGIWPVYKSMAQLDFAKAGLVVAAGAFIGEGAQLFFGAFSDRGYRKHLMI
LGLLLVVASTLVVQFSHYGILFCLYLFTCLGSGSFHPAAGSLMGSLIPTRRGLLMAIFASGGSLGLAFSQLIFLFVYKNM
NGQTYLLAIPAIILSFFLIFYRFPVIQSVQHTLKKGILRDFKAFFCHIPLRMLYLAQVANQSILWGMIFILPDALKTLGL
AEWIYYGGGHLCLILGGACMMVPAGYLADKYSPRQVILYAGIVSCATFYFILFFGSFSMWLSLLLLFILGASLTLVNPIG
IALGVRYAPGQAGSISAFLMGMVWCISEAIGPGSVGLMTAFFENYAPIKALAVLGLLFLIQIYATFSLPKEEQELVFSPC

Sequences:

>Translated_400_residues
MVFSAKQSIPLSLAPLLALTWLAHFFIDTMLGIWPVYKSMAQLDFAKAGLVVAAGAFIGEGAQLFFGAFSDRGYRKHLMI
LGLLLVVASTLVVQFSHYGILFCLYLFTCLGSGSFHPAAGSLMGSLIPTRRGLLMAIFASGGSLGLAFSQLIFLFVYKNM
NGQTYLLAIPAIILSFFLIFYRFPVIQSVQHTLKKGILRDFKAFFCHIPLRMLYLAQVANQSILWGMIFILPDALKTLGL
AEWIYYGGGHLCLILGGACMMVPAGYLADKYSPRQVILYAGIVSCATFYFILFFGSFSMWLSLLLLFILGASLTLVNPIG
IALGVRYAPGQAGSISAFLMGMVWCISEAIGPGSVGLMTAFFENYAPIKALAVLGLLFLIQIYATFSLPKEEQELVFSPC
>Mature_400_residues
MVFSAKQSIPLSLAPLLALTWLAHFFIDTMLGIWPVYKSMAQLDFAKAGLVVAAGAFIGEGAQLFFGAFSDRGYRKHLMI
LGLLLVVASTLVVQFSHYGILFCLYLFTCLGSGSFHPAAGSLMGSLIPTRRGLLMAIFASGGSLGLAFSQLIFLFVYKNM
NGQTYLLAIPAIILSFFLIFYRFPVIQSVQHTLKKGILRDFKAFFCHIPLRMLYLAQVANQSILWGMIFILPDALKTLGL
AEWIYYGGGHLCLILGGACMMVPAGYLADKYSPRQVILYAGIVSCATFYFILFFGSFSMWLSLLLLFILGASLTLVNPIG
IALGVRYAPGQAGSISAFLMGMVWCISEAIGPGSVGLMTAFFENYAPIKALAVLGLLFLIQIYATFSLPKEEQELVFSPC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43677; Mature: 43677

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCC
>Mature Secondary Structure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HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA