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The map label for this gene is sdhC

Identifier: 46447477

GI number: 46447477

Start: 2203334

End: 2204296

Strand: Reverse

Name: sdhC

Synonym: pc1843

Alternate gene names: NA

Gene position: 2204296-2203334 (Counterclockwise)

Preceding gene: 46447478

Following gene: 46447476

Centisome position: 91.3

GC content: 35.51

Gene sequence:

>963_bases
ATGACTTATACTTATCAATCTCCTCCTATTCCTAAAGCTTTTATTTGGCGAAGAGCTCATTCTTTAACAGGTCTTTGGTT
AGTTTTATTTTTGATCGAACATTTACTAACTAATTCTCAAGCGGCGCTTTTTATTGGAGATGATGGAAGTGGCTTTGTAG
CGGCAGTCAACTGGATAAAAGGATTACCTTATTTACCTTTGATTGAAATCATTTTATTAGGATTACCACTTTTAATTCAT
GGATTTTGGGGCATTCATTATTTATTTCAGGCAAAATACAATACTCAGCCTTCTGATGGATCGCAACCTTCTCTTCCAGG
GCATTTTCGCAATCATGCCTATACATGGCAAAGAATTACTTCGTGGATTTTATTGTTTGGAATTGTGGCTCATGTCATTC
ATATGCGTTTTTTAGAATATCCAGTAACTGCTCAATTGGACACTCAACATTATTATCTCGTTCGCTTGGAAAAAGATAAT
GGTTTGTACACCCTTTCTAAAAGACTAGGATTTGATCTCTACTCTCAATCGCAAATTCAAGAGATAAAACAAACTATTTT
CTCCCATTTAGGTCCTTTAGTTGCTTTGGAAGAAACTCCTGAGCAATTAATTGCAGCTCAGAAAAATCGCGAAGAAAAAG
CTTGGGTAGAGGCTTTTGAAAGTTTACATATAAACGCAAATCAGTTAGTGGCCGCATCAAAAACTTTTGGTATCGCTGAA
TTATTAATTGTAAGAGATACTTTCAAAAAACCAATCATGATTTTTTTGTATTCTGGTCTTGTGATTGCTGCTTGTTTTCA
CGCTTTTAATGGACTTTGGACATTTATGATCACCTGGGGGATTTCTTTGACTGCTAGATCTCAAAATTTTATGAGGAAAA
TGGCTACTTTACTGATGATCATGATTGCTTTTTTGGGGTTTGCGGCGATTTGGGGCACATATTGGTTTAATCTCTCACAT
TAA

Upstream 100 bases:

>100_bases
AATGAAAATATCATTATATATGATCAATTTTAAATTGAATTGGATCCACTAGCTAGGTATATATAGACTCAAAACATTGG
AAATCGTTTTTGAGTATCCC

Downstream 100 bases:

>100_bases
TAGGAATTGGTAAGATGTCTAAAGCTAAAGAAGTAATCGTGGTTGGAGGGGGATTATCAGGGCTTTCTACGGCTATGAAA
CTCGCAGAAAATGGTTGCAA

Product: putative succinate dehydrogenase cytochrome b558

Products: fumarate; reduced acceptor

Alternate protein names: Subunit Of Succinate Dehydrogenase; Succinate Dehydrogenase Subunit C; Succinate Dehydrogenase Cytochrome B-; Succinate Dehydrogenase Cytochrome B; Succinate Dehydrogenase Subunit

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MTYTYQSPPIPKAFIWRRAHSLTGLWLVLFLIEHLLTNSQAALFIGDDGSGFVAAVNWIKGLPYLPLIEIILLGLPLLIH
GFWGIHYLFQAKYNTQPSDGSQPSLPGHFRNHAYTWQRITSWILLFGIVAHVIHMRFLEYPVTAQLDTQHYYLVRLEKDN
GLYTLSKRLGFDLYSQSQIQEIKQTIFSHLGPLVALEETPEQLIAAQKNREEKAWVEAFESLHINANQLVAASKTFGIAE
LLIVRDTFKKPIMIFLYSGLVIAACFHAFNGLWTFMITWGISLTARSQNFMRKMATLLMIMIAFLGFAAIWGTYWFNLSH

Sequences:

>Translated_320_residues
MTYTYQSPPIPKAFIWRRAHSLTGLWLVLFLIEHLLTNSQAALFIGDDGSGFVAAVNWIKGLPYLPLIEIILLGLPLLIH
GFWGIHYLFQAKYNTQPSDGSQPSLPGHFRNHAYTWQRITSWILLFGIVAHVIHMRFLEYPVTAQLDTQHYYLVRLEKDN
GLYTLSKRLGFDLYSQSQIQEIKQTIFSHLGPLVALEETPEQLIAAQKNREEKAWVEAFESLHINANQLVAASKTFGIAE
LLIVRDTFKKPIMIFLYSGLVIAACFHAFNGLWTFMITWGISLTARSQNFMRKMATLLMIMIAFLGFAAIWGTYWFNLSH
>Mature_319_residues
TYTYQSPPIPKAFIWRRAHSLTGLWLVLFLIEHLLTNSQAALFIGDDGSGFVAAVNWIKGLPYLPLIEIILLGLPLLIHG
FWGIHYLFQAKYNTQPSDGSQPSLPGHFRNHAYTWQRITSWILLFGIVAHVIHMRFLEYPVTAQLDTQHYYLVRLEKDNG
LYTLSKRLGFDLYSQSQIQEIKQTIFSHLGPLVALEETPEQLIAAQKNREEKAWVEAFESLHINANQLVAASKTFGIAEL
LIVRDTFKKPIMIFLYSGLVIAACFHAFNGLWTFMITWGISLTARSQNFMRKMATLLMIMIAFLGFAAIWGTYWFNLSH

Specific function: Unknown

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 36668; Mature: 36537

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYTYQSPPIPKAFIWRRAHSLTGLWLVLFLIEHLLTNSQAALFIGDDGSGFVAAVNWIK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHC
GLPYLPLIEIILLGLPLLIHGFWGIHYLFQAKYNTQPSDGSQPSLPGHFRNHAYTWQRIT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHCCHHHHHHHH
SWILLFGIVAHVIHMRFLEYPVTAQLDTQHYYLVRLEKDNGLYTLSKRLGFDLYSQSQIQ
HHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEEECCCCEEEEHHHHCCCCCCHHHHH
EIKQTIFSHLGPLVALEETPEQLIAAQKNREEKAWVEAFESLHINANQLVAASKTFGIAE
HHHHHHHHHCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHEEHHHHCCHHH
LLIVRDTFKKPIMIFLYSGLVIAACFHAFNGLWTFMITWGISLTARSQNFMRKMATLLMI
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHH
MIAFLGFAAIWGTYWFNLSH
HHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure 
TYTYQSPPIPKAFIWRRAHSLTGLWLVLFLIEHLLTNSQAALFIGDDGSGFVAAVNWIK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHC
GLPYLPLIEIILLGLPLLIHGFWGIHYLFQAKYNTQPSDGSQPSLPGHFRNHAYTWQRIT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHCCHHHHHHHH
SWILLFGIVAHVIHMRFLEYPVTAQLDTQHYYLVRLEKDNGLYTLSKRLGFDLYSQSQIQ
HHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEEECCCCEEEEHHHHCCCCCCHHHHH
EIKQTIFSHLGPLVALEETPEQLIAAQKNREEKAWVEAFESLHINANQLVAASKTFGIAE
HHHHHHHHHCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHEEHHHHCCHHH
LLIVRDTFKKPIMIFLYSGLVIAACFHAFNGLWTFMITWGISLTARSQNFMRKMATLLMI
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHH
MIAFLGFAAIWGTYWFNLSH
HHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA