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The map label for this gene is lplA

Identifier: 46447472

GI number: 46447472

Start: 2195435

End: 2196136

Strand: Reverse

Name: lplA

Synonym: pc1838

Alternate gene names: NA

Gene position: 2196136-2195435 (Counterclockwise)

Preceding gene: 46447473

Following gene: 46447471

Centisome position: 90.96

GC content: 34.19

Gene sequence:

>702_bases
GTGCAGTTAAAAAACGTTCCTATTTTAACTCAGTTAAAATGGGAAGAAGCTTTACTACGTACAAAACACGACAACTGGTG
TTTAATTAATCAAGGCTCACCGCCAGCTGTTGTTCTAGGGATTTCTGGGCGTGTTGATGAGTTGATTAATTTAAATTATT
TCTATCAAAACCCAATTCCTTTGATTCGTCGTTTTAGTGGAGGAGGAACAGTGGTTGTGGATGAAAATACCATTTTTGTC
ACCTTTATTTGTCATGCTTCACAATTATCTATTTCTCCTTTCCCTCAACATATTATGCAATGGACAGAAGAATTTTACCG
TCCTATTTTCCCAACTCACCCATTTCAGTTAAAAGAAAACGATTATGTTATGGGCCTAAGGAAATTTGGAGGTAATGCGC
AATCGATTACTAAAAATCGGTGGTTACATCATAGTTCGTTGCTTTGGGACTTTTGCTATGATAAAATGCAATATTTATCT
CTTCCTAAAAAAAGACCCCATTATCGGAAAGATCGATCCCATTTAGATTTCCTTTGTTCGTTAAAAGATTTTTGTTCCGA
TCAATCAAAGTTCCAAGATCAACTCTTGAATAGACTCGAACAGAAGTTTTCTTTAAAACATTGCTCCATTAATGATTTAA
AAGAAATATCTCAAATTCCTCATCGTCACATAACTCAAGAGATTTTTTTAGATTTTTTATGA

Upstream 100 bases:

>100_bases
TTTAATGATTGCTCTTACGCGGTATCAAGAGCCAATAGAAAAAGAACGGCTAACATCTGATTGTTCCGAGGCATAAGAGG
TCATGCTTGAATGTAATGTT

Downstream 100 bases:

>100_bases
ATTTTTTATCATAAAAAATGTTTCCCTTTTTACTATTAATCCTAAATAGTTTTCATTAAGGATTAAAAGTCTATTGACCT
GCTTTTGCAATTAGATTAAA

Product: putative lipoate-protein ligase

Products: NA

Alternate protein names: Lipoate-Protein Ligase A-Related Protein; Lipoate Protein Ligase A; Lipoate-Protein Ligase; Lipoate-Protein Ligase-Related Protein; Biotin/Lipoate A/B Protein Ligase

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MQLKNVPILTQLKWEEALLRTKHDNWCLINQGSPPAVVLGISGRVDELINLNYFYQNPIPLIRRFSGGGTVVVDENTIFV
TFICHASQLSISPFPQHIMQWTEEFYRPIFPTHPFQLKENDYVMGLRKFGGNAQSITKNRWLHHSSLLWDFCYDKMQYLS
LPKKRPHYRKDRSHLDFLCSLKDFCSDQSKFQDQLLNRLEQKFSLKHCSINDLKEISQIPHRHITQEIFLDFL

Sequences:

>Translated_233_residues
MQLKNVPILTQLKWEEALLRTKHDNWCLINQGSPPAVVLGISGRVDELINLNYFYQNPIPLIRRFSGGGTVVVDENTIFV
TFICHASQLSISPFPQHIMQWTEEFYRPIFPTHPFQLKENDYVMGLRKFGGNAQSITKNRWLHHSSLLWDFCYDKMQYLS
LPKKRPHYRKDRSHLDFLCSLKDFCSDQSKFQDQLLNRLEQKFSLKHCSINDLKEISQIPHRHITQEIFLDFL
>Mature_233_residues
MQLKNVPILTQLKWEEALLRTKHDNWCLINQGSPPAVVLGISGRVDELINLNYFYQNPIPLIRRFSGGGTVVVDENTIFV
TFICHASQLSISPFPQHIMQWTEEFYRPIFPTHPFQLKENDYVMGLRKFGGNAQSITKNRWLHHSSLLWDFCYDKMQYLS
LPKKRPHYRKDRSHLDFLCSLKDFCSDQSKFQDQLLNRLEQKFSLKHCSINDLKEISQIPHRHITQEIFLDFL

Specific function: Unknown

COG id: COG0095

COG function: function code H; Lipoate-protein ligase A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27537; Mature: 27537

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKNVPILTQLKWEEALLRTKHDNWCLINQGSPPAVVLGISGRVDELINLNYFYQNPIP
CCCCCCCEEEEHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCHHHHHCCEEEECCCHH
LIRRFSGGGTVVVDENTIFVTFICHASQLSISPFPQHIMQWTEEFYRPIFPTHPFQLKEN
HHEEECCCCEEEEECCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCC
DYVMGLRKFGGNAQSITKNRWLHHSSLLWDFCYDKMQYLSLPKKRPHYRKDRSHLDFLCS
CEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
LKDFCSDQSKFQDQLLNRLEQKFSLKHCSINDLKEISQIPHRHITQEIFLDFL
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQLKNVPILTQLKWEEALLRTKHDNWCLINQGSPPAVVLGISGRVDELINLNYFYQNPIP
CCCCCCCEEEEHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCHHHHHCCEEEECCCHH
LIRRFSGGGTVVVDENTIFVTFICHASQLSISPFPQHIMQWTEEFYRPIFPTHPFQLKEN
HHEEECCCCEEEEECCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCC
DYVMGLRKFGGNAQSITKNRWLHHSSLLWDFCYDKMQYLSLPKKRPHYRKDRSHLDFLCS
CEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
LKDFCSDQSKFQDQLLNRLEQKFSLKHCSINDLKEISQIPHRHITQEIFLDFL
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA