Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447408
Identifier: 46447408
GI number: 46447408
Start: 2126735
End: 2127556
Strand: Reverse
Name: 46447408
Synonym: pc1774
Alternate gene names: NA
Gene position: 2127556-2126735 (Counterclockwise)
Preceding gene: 46447412
Following gene: 46447406
Centisome position: 88.12
GC content: 34.43
Gene sequence:
>822_bases ATGAATCCAGAATTAAGATTTGAAACAGCATTGAAAGCTTGCTATGGTCAAAACGAAAAAATAAACAGTAACGAAAAAAT TTTATTGGTTCAAAATGGCCAATGGCAGAGCGTTGATCAATCCTACAAGTATATCCAAGCTCTATTTGAACAAACGATTC AAGAAATAGTCTTGCTAGATTCGAGTCAAATAAATACTCCTTTTTTAGCTGTTTGGATTCGAGATTTTAATGCGACTAAA ACGACAAAAGATTTGCAAAATAAAAAAATTACAACCATTAAAGCCTCTGATACCCATATTCAATTTAGTTCTGTAAAAGG ATTTGAATGGTTGTCCAATTTTTATCCCACGCTTATATATGATGCTGAAAATCAATTTATTTATCCCCACGTAGAGGCCG CTTATGTGGCCTTTAAAGCTAAAATGGCGGGTAAAAGCCCAGAAGAAGTCAGAGAATTTGCAATAACAATAGACCCCAAA TTAGTGAAACAGCTTGGATCTCATTTGTGGAGATGGGAAACTCCTGAAGATGGTAAAAAAGTAATTCAAGAAATGAGGCG TTTGGTGGCATTAAAAGTGAGTCAAAATCCTCTAATTAAAACTTGGCTAACGCCTTCGGCGGATCGATCGTTGACTTTCG AAGAATTTACATCAGATACATTTTGGGGAAGCGGTTATGGAACAAAGATCGATGATATGCAATCTAATCATTTAGGAAGA ATTTTTAATGAAATCAGCAACGAGCTCAAAAGCAATAGTAATGTCCAAAATTTCACCAATTCAGCACTGAAAGCAAAATC AAAAAAATCTAGAAATTATTAG
Upstream 100 bases:
>100_bases TTAAGAAAAACATTTTCTAAATATTCAAATTTAATTTGATAAATATTATTATCTAAACTAAAAAGTTTTTAAATTTATAT AAATTTTAAAGAGAGATGAT
Downstream 100 bases:
>100_bases TGAGCGGGCCAATTTTTATTTTTCCGAATAAAAAATTAACTTCTTGAGCTTGAGACTAGACAAGTTGACTTTGAAATTCT ACTTGGCGAATTTCAAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MNPELRFETALKACYGQNEKINSNEKILLVQNGQWQSVDQSYKYIQALFEQTIQEIVLLDSSQINTPFLAVWIRDFNATK TTKDLQNKKITTIKASDTHIQFSSVKGFEWLSNFYPTLIYDAENQFIYPHVEAAYVAFKAKMAGKSPEEVREFAITIDPK LVKQLGSHLWRWETPEDGKKVIQEMRRLVALKVSQNPLIKTWLTPSADRSLTFEEFTSDTFWGSGYGTKIDDMQSNHLGR IFNEISNELKSNSNVQNFTNSALKAKSKKSRNY
Sequences:
>Translated_273_residues MNPELRFETALKACYGQNEKINSNEKILLVQNGQWQSVDQSYKYIQALFEQTIQEIVLLDSSQINTPFLAVWIRDFNATK TTKDLQNKKITTIKASDTHIQFSSVKGFEWLSNFYPTLIYDAENQFIYPHVEAAYVAFKAKMAGKSPEEVREFAITIDPK LVKQLGSHLWRWETPEDGKKVIQEMRRLVALKVSQNPLIKTWLTPSADRSLTFEEFTSDTFWGSGYGTKIDDMQSNHLGR IFNEISNELKSNSNVQNFTNSALKAKSKKSRNY >Mature_273_residues MNPELRFETALKACYGQNEKINSNEKILLVQNGQWQSVDQSYKYIQALFEQTIQEIVLLDSSQINTPFLAVWIRDFNATK TTKDLQNKKITTIKASDTHIQFSSVKGFEWLSNFYPTLIYDAENQFIYPHVEAAYVAFKAKMAGKSPEEVREFAITIDPK LVKQLGSHLWRWETPEDGKKVIQEMRRLVALKVSQNPLIKTWLTPSADRSLTFEEFTSDTFWGSGYGTKIDDMQSNHLGR IFNEISNELKSNSNVQNFTNSALKAKSKKSRNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31470; Mature: 31470
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPELRFETALKACYGQNEKINSNEKILLVQNGQWQSVDQSYKYIQALFEQTIQEIVLLD CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC SSQINTPFLAVWIRDFNATKTTKDLQNKKITTIKASDTHIQFSSVKGFEWLSNFYPTLIY CCCCCCCEEEEEEECCCCCCCHHHHCCCEEEEEECCCCEEEEECCCHHHHHHHCCCEEEE DAENQFIYPHVEAAYVAFKAKMAGKSPEEVREFAITIDPKLVKQLGSHLWRWETPEDGKK ECCCCEECCCHHHHHHHHHHHHCCCCHHHHHHEEEEECHHHHHHHHHHHCCCCCCCHHHH VIQEMRRLVALKVSQNPLIKTWLTPSADRSLTFEEFTSDTFWGSGYGTKIDDMQSNHLGR HHHHHHHHHEECCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHH IFNEISNELKSNSNVQNFTNSALKAKSKKSRNY HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNPELRFETALKACYGQNEKINSNEKILLVQNGQWQSVDQSYKYIQALFEQTIQEIVLLD CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC SSQINTPFLAVWIRDFNATKTTKDLQNKKITTIKASDTHIQFSSVKGFEWLSNFYPTLIY CCCCCCCEEEEEEECCCCCCCHHHHCCCEEEEEECCCCEEEEECCCHHHHHHHCCCEEEE DAENQFIYPHVEAAYVAFKAKMAGKSPEEVREFAITIDPKLVKQLGSHLWRWETPEDGKK ECCCCEECCCHHHHHHHHHHHHCCCCHHHHHHEEEEECHHHHHHHHHHHCCCCCCCHHHH VIQEMRRLVALKVSQNPLIKTWLTPSADRSLTFEEFTSDTFWGSGYGTKIDDMQSNHLGR HHHHHHHHHEECCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHH IFNEISNELKSNSNVQNFTNSALKAKSKKSRNY HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA