Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447371

Identifier: 46447371

GI number: 46447371

Start: 2076864

End: 2077892

Strand: Reverse

Name: 46447371

Synonym: pc1737

Alternate gene names: NA

Gene position: 2077892-2076864 (Counterclockwise)

Preceding gene: 46447372

Following gene: 46447370

Centisome position: 86.06

GC content: 37.8

Gene sequence:

>1029_bases
ATGTCGACATTATTGTTACAAAATCTGTTAGAAAATGGAACAGAATTTTATTTTTTTATCTTTGTACTTGCTATTGTCTT
GCTGATTATTTTAAGTGTAATTGGTAAATTTATCAGTTTATGGTTTCAAGCCTTTGTATCTGGGACACCCATTCCTCTTT
TTAATATCATCGGAATGAGTTTGCGTAAAATTCCTCCAAGGGAAATCGTCAATGCCAGAATCAACTTATACAAAGCTGGA
TTAAAAGATATTCATGTTGGAGATTTAGAAACGCATTATTTGGCTGGTGGACATGTTCCTAATGTAGTCGAAGCTTTAAT
CGCTGCTGATAAAGCTAATATTCCTCTCGATTGGAGACGTGCAACGGCAATTGATTTAGCGGGTCGCGATATTAAAGCTG
CCGTCCAGACGTCAGTAAATCCACGCGTGATTGATTGTCCAAATCATGGAGGATATATTACGGGGGTTGCTAAAGACGGA
ATTCAATTAAATTGCCGTGCCAGAGTAACAGTGAGGACAAATATCGCTCAATTAGTTGGGGGGGCGACGGAAGAGACGAT
TATTGCTCGTGTGGGAGAAGGAATTGTGAGTGCAATTGGAGGATCTGATACGCATAAACAAGTTTTAGAATCTCCTCAAA
AAATTTCAAAACTTGTGCTTGAAAAAGGGCTTGATTCCTCAACAGCATTTTTAATTCTCTCCATTGATATCGTAGAAATT
AATTTAGGCGAAAATATTGGGGCGAAACTCAGAACGGATCAAGCTGAATCTGATATTCGAATTGCAAAAGCGGAAGCTGA
AAAAAGACGGACGATGGCTGTTGCTCAAGAACAGGAAAATTTAGCGAAAGTCAGAGATATGGAAGCAAAACTTGTTGAAG
CACAAGCAGCTGTTCCTTTAGCGATGGCAGAAGCATTTAGAAGTGGAAAATTAGGTATTATGGATTATCAACGTATTCAA
AATATTCAGTCAGATACGGATATGCGTAATGCATTAGCAAAACCAGATTCAGATAAAAAGCAAAATTAA

Upstream 100 bases:

>100_bases
TTTCCGGGCAAGAAGAAAGTTTAATTGTAAAAAACTTATTTCCCACTCAAACAATTTAAAAAAGATTAAGAAGAATAAAA
TTTCATCGAAGGAATTAACT

Downstream 100 bases:

>100_bases
GGTCTTTTTTTTATGTCTATTGTGGAGTTTATTGGATTTGCGATTAGCTTTTTTTCTCTCATCTTCTTATTTTTTCGCAA
TCAAGCTTATTTTTTTCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSTLLLQNLLENGTEFYFFIFVLAIVLLIILSVIGKFISLWFQAFVSGTPIPLFNIIGMSLRKIPPREIVNARINLYKAG
LKDIHVGDLETHYLAGGHVPNVVEALIAADKANIPLDWRRATAIDLAGRDIKAAVQTSVNPRVIDCPNHGGYITGVAKDG
IQLNCRARVTVRTNIAQLVGGATEETIIARVGEGIVSAIGGSDTHKQVLESPQKISKLVLEKGLDSSTAFLILSIDIVEI
NLGENIGAKLRTDQAESDIRIAKAEAEKRRTMAVAQEQENLAKVRDMEAKLVEAQAAVPLAMAEAFRSGKLGIMDYQRIQ
NIQSDTDMRNALAKPDSDKKQN

Sequences:

>Translated_342_residues
MSTLLLQNLLENGTEFYFFIFVLAIVLLIILSVIGKFISLWFQAFVSGTPIPLFNIIGMSLRKIPPREIVNARINLYKAG
LKDIHVGDLETHYLAGGHVPNVVEALIAADKANIPLDWRRATAIDLAGRDIKAAVQTSVNPRVIDCPNHGGYITGVAKDG
IQLNCRARVTVRTNIAQLVGGATEETIIARVGEGIVSAIGGSDTHKQVLESPQKISKLVLEKGLDSSTAFLILSIDIVEI
NLGENIGAKLRTDQAESDIRIAKAEAEKRRTMAVAQEQENLAKVRDMEAKLVEAQAAVPLAMAEAFRSGKLGIMDYQRIQ
NIQSDTDMRNALAKPDSDKKQN
>Mature_341_residues
STLLLQNLLENGTEFYFFIFVLAIVLLIILSVIGKFISLWFQAFVSGTPIPLFNIIGMSLRKIPPREIVNARINLYKAGL
KDIHVGDLETHYLAGGHVPNVVEALIAADKANIPLDWRRATAIDLAGRDIKAAVQTSVNPRVIDCPNHGGYITGVAKDGI
QLNCRARVTVRTNIAQLVGGATEETIIARVGEGIVSAIGGSDTHKQVLESPQKISKLVLEKGLDSSTAFLILSIDIVEIN
LGENIGAKLRTDQAESDIRIAKAEAEKRRTMAVAQEQENLAKVRDMEAKLVEAQAAVPLAMAEAFRSGKLGIMDYQRIQN
IQSDTDMRNALAKPDSDKKQN

Specific function: Unknown

COG id: COG4864

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0365 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1737_PARUW (Q6MAD8)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_008736.1
- STRING:   Q6MAD8
- GeneID:   2779727
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc1737
- NMPDR:   fig|264201.1.peg.1737
- eggNOG:   COG4864
- HOGENOM:   HBG302807
- OMA:   ENPDMIS
- ProtClustDB:   PRK13665
- BioCyc:   CPRO264201:PC1737-MONOMER
- HAMAP:   MF_01562
- InterPro:   IPR022853

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37287; Mature: 37156

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf455834)-; HASH(0xe4e0910)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLLLQNLLENGTEFYFFIFVLAIVLLIILSVIGKFISLWFQAFVSGTPIPLFNIIGMS
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LRKIPPREIVNARINLYKAGLKDIHVGDLETHYLAGGHVPNVVEALIAADKANIPLDWRR
HHCCCHHHHHHHHHHHHHCCCCCEEECCCCHHEECCCCCHHHHHHHHHHCCCCCCCCCCH
ATAIDLAGRDIKAAVQTSVNPRVIDCPNHGGYITGVAKDGIQLNCRARVTVRTNIAQLVG
HEEEECCCCHHHHHHHCCCCCEEEECCCCCCEEEEEECCCEEEEEEEEEEEHHHHHHHHC
GATEETIIARVGEGIVSAIGGSDTHKQVLESPQKISKLVLEKGLDSSTAFLILSIDIVEI
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEEEEEEE
NLGENIGAKLRTDQAESDIRIAKAEAEKRRTMAVAQEQENLAKVRDMEAKLVEAQAAVPL
ECCCCCCCCEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMAEAFRSGKLGIMDYQRIQNIQSDTDMRNALAKPDSDKKQN
HHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCH
>Mature Secondary Structure 
STLLLQNLLENGTEFYFFIFVLAIVLLIILSVIGKFISLWFQAFVSGTPIPLFNIIGMS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LRKIPPREIVNARINLYKAGLKDIHVGDLETHYLAGGHVPNVVEALIAADKANIPLDWRR
HHCCCHHHHHHHHHHHHHCCCCCEEECCCCHHEECCCCCHHHHHHHHHHCCCCCCCCCCH
ATAIDLAGRDIKAAVQTSVNPRVIDCPNHGGYITGVAKDGIQLNCRARVTVRTNIAQLVG
HEEEECCCCHHHHHHHCCCCCEEEECCCCCCEEEEEECCCEEEEEEEEEEEHHHHHHHHC
GATEETIIARVGEGIVSAIGGSDTHKQVLESPQKISKLVLEKGLDSSTAFLILSIDIVEI
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEEEEEEEE
NLGENIGAKLRTDQAESDIRIAKAEAEKRRTMAVAQEQENLAKVRDMEAKLVEAQAAVPL
ECCCCCCCCEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMAEAFRSGKLGIMDYQRIQNIQSDTDMRNALAKPDSDKKQN
HHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA