Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447277
Identifier: 46447277
GI number: 46447277
Start: 1973177
End: 1973878
Strand: Reverse
Name: 46447277
Synonym: pc1643
Alternate gene names: NA
Gene position: 1973878-1973177 (Counterclockwise)
Preceding gene: 46447281
Following gene: 46447273
Centisome position: 81.75
GC content: 32.48
Gene sequence:
>702_bases ATGGTCGAACTATCTATTGATTTTGTCGTAAACATGGTGAATGGTAATTTTTATGATACAAATGTAGAGGTAGCAGCAAA CTTATTCGTCGTCTCAAAAAAGAATAATCGATTAAAAAAGATTGATCTAACTCGAGATCTTGAAAAAATTGAAAAATGGG CTGAAAACAATCGCTTTGTGGCAGTTGTTGAAAAAGGGGATCAGACTTTTATTTGCGCAAGTTCTCAAATTGTAGAAAGT TTAAAAAAACAAAATGAGTTAAATATCGAGGGAAAGCAGCTTAGTTATTGTGTGCTATCTGATGATGATTCTGAAAGAAT GTCCGCTATTGCCATGGAGGCATTAAATTTAAGTGAAAACTCTTTAGAGAATGAAAAAAAAGATCATAAAATTCCGCCGC ATGAGACAACTAAAAGTTTCGTCCGCGACTATTTAGCCAAAATTTCTACAAAAAAAGATCAAACCATGACAATTGATTGT TTGATTTATAAGATGAAAAACATTCCAGGTAAGCAAATTCTTAAATTTCTACGCGATATGCAAGAGACTAGGAATGAGCA AGAGCGCAGAAAAAAAGAAGACTTGATCCGACAAGAAGTAAAATCGATAGACCTCAAACATGCAATATTTAAAAAAGAAA TTTTAAAAAATGAAGTGAAAAAGAGTGAAATTAAAGCCCAAACTAAAAGGCTGTCTAGCTAA
Upstream 100 bases:
>100_bases ATCAATTATAATTTTTTTATTTGTGTAATTTGTTGTCATAAATTTTTTTATTTTTTATAATAAATGTTACTATTAATGTA ATAATAAGAGGGAGCTATAT
Downstream 100 bases:
>100_bases TCGTGCCTTTAGTTGTTGTTAAAAGGAGTTTAAAATTGGTTACTCAACAGCAGAAAATGTAAGATTATCTGCTTTTCGAT CTTGAAATTCAAGCCAGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MVELSIDFVVNMVNGNFYDTNVEVAANLFVVSKKNNRLKKIDLTRDLEKIEKWAENNRFVAVVEKGDQTFICASSQIVES LKKQNELNIEGKQLSYCVLSDDDSERMSAIAMEALNLSENSLENEKKDHKIPPHETTKSFVRDYLAKISTKKDQTMTIDC LIYKMKNIPGKQILKFLRDMQETRNEQERRKKEDLIRQEVKSIDLKHAIFKKEILKNEVKKSEIKAQTKRLSS
Sequences:
>Translated_233_residues MVELSIDFVVNMVNGNFYDTNVEVAANLFVVSKKNNRLKKIDLTRDLEKIEKWAENNRFVAVVEKGDQTFICASSQIVES LKKQNELNIEGKQLSYCVLSDDDSERMSAIAMEALNLSENSLENEKKDHKIPPHETTKSFVRDYLAKISTKKDQTMTIDC LIYKMKNIPGKQILKFLRDMQETRNEQERRKKEDLIRQEVKSIDLKHAIFKKEILKNEVKKSEIKAQTKRLSS >Mature_233_residues MVELSIDFVVNMVNGNFYDTNVEVAANLFVVSKKNNRLKKIDLTRDLEKIEKWAENNRFVAVVEKGDQTFICASSQIVES LKKQNELNIEGKQLSYCVLSDDDSERMSAIAMEALNLSENSLENEKKDHKIPPHETTKSFVRDYLAKISTKKDQTMTIDC LIYKMKNIPGKQILKFLRDMQETRNEQERRKKEDLIRQEVKSIDLKHAIFKKEILKNEVKKSEIKAQTKRLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27090; Mature: 27090
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVELSIDFVVNMVNGNFYDTNVEVAANLFVVSKKNNRLKKIDLTRDLEKIEKWAENNRFV CEEEEEEHEEEHHCCCEECCCCEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHCCCCEE AVVEKGDQTFICASSQIVESLKKQNELNIEGKQLSYCVLSDDDSERMSAIAMEALNLSEN EEEECCCCEEEECCHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHH SLENEKKDHKIPPHETTKSFVRDYLAKISTKKDQTMTIDCLIYKMKNIPGKQILKFLRDM HHHCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHH QETRNEQERRKKEDLIRQEVKSIDLKHAIFKKEILKNEVKKSEIKAQTKRLSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVELSIDFVVNMVNGNFYDTNVEVAANLFVVSKKNNRLKKIDLTRDLEKIEKWAENNRFV CEEEEEEHEEEHHCCCEECCCCEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHCCCCEE AVVEKGDQTFICASSQIVESLKKQNELNIEGKQLSYCVLSDDDSERMSAIAMEALNLSEN EEEECCCCEEEECCHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHH SLENEKKDHKIPPHETTKSFVRDYLAKISTKKDQTMTIDCLIYKMKNIPGKQILKFLRDM HHHCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHH QETRNEQERRKKEDLIRQEVKSIDLKHAIFKKEILKNEVKKSEIKAQTKRLSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA