| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is yfiQ [H]
Identifier: 46447204
GI number: 46447204
Start: 1882604
End: 1885366
Strand: Reverse
Name: yfiQ [H]
Synonym: pc1570
Alternate gene names: 46447204
Gene position: 1885366-1882604 (Counterclockwise)
Preceding gene: 46447208
Following gene: 46447203
Centisome position: 78.09
GC content: 36.66
Gene sequence:
>2763_bases ATGAATGAAAGGGTATTACATCGAACTGATCCTTCTCAAAATTTTATTCATCGTTATCCTCAGCGTTTAGATGCGATTTT TTATCCCAAAACGATTGCTGTGATAGGAGCAAAAGACGATTTTGGTAGCGTTGGCGCAACCATTATGAATAATTTGACTA ATGGATTATTCAAAGGAAAAATTTATCCTATTAATCCTAAAAGAGATCGTATTTTAGATCTCATATCTTTCCCCTCAATT TCTTCTGTGCCTGAAGTTGTGGACTTGGCCATTATTGTGACTCCTGCGTTAACGGTTCCGAAGATTATCAAGGAATGCGT GAATGCTAAAGTTAAATCGGCAATTATTATTTCAGCAGGCTTTAAAGAATTAGGAGAAGCAGGGAAAAAATTAGAAGAAG AAATCCTTTTTTATGCGAAACAAGGTCCTTTATCAATTATTGGTCCTAACTGTTTAGGTATCATGAATCCTCACACTGGA TTAAACGCTAGCTTTGCAAAAGGGCTAGCTTTACCGGGTCAACTCGCTTTTATTAGTCAGTCTGGAGCCATGTGTACAGC TGTTTTAGATTGGAGTTGGCAAGAAAAAGTAGGGTTTAGCTCATTTGTTTCTATCGGTTCGATGGCAGATGTTAACTGGG GAACTCTAATCGACTATTTTGGAAGTGATCCTCATACTAGTAGCCTCTTACTTTATATGGAAACGATTGGCGATGCACGA TCTTTTATGACAGCTGCCCGAGAAGTTGCTTTAGAAAAACCGATTATTGTTATCAAAGCTGGACGATGTCAAGCAGCAGC TAATGCAGCAGCCTCTCATACAGGTTCCTTAGCAGGCAGTGATGAAGTTTTTGATGCAGCTTTAGAAAGAATAGGCGTTT TACGTGTTAATCATATTTCTGAACTTTTTAGCATGGCTTCCGTATTAGCACGTCAACCCCTTCCTAAAGGCCCCAATCTG TCAATTATTACGAATGCTGGAGGTCCTGCGGTCCTGGCTACGGATGCTACTGTATTAAATCATGCTGAAATGGCGCCATT AACACCTCTAACTATCAATAGTTTAAACGAATTTTTACCTCAAGCTTGGAGCCATAGCAATCCAATTGACATTTTAGGAG ATGCAGATGCTAAACGGTATGCGAAAACGGTTGAAATTATCGTAAATGATGCAAATTCTGATGGACTATTAGTGATTCTT TCTCCTCAAGATATGACAGATGCTAAAGGAACAGCAGAAATACTGACTAAGTTTGCGATCCTCAATGAAAAACCACTTTT AACAAGTTGGATGGGGGGAGATTCTGTTATAGAAGGAGCAAATATTTTATCGCATGCTAAAATTCCTGTTTTTAATTATC CGGATGATGCTGCAAAAACTTTTGCAACCATGTGGCGTTATAGCCAAAATTTAAAAACTCTTTACGAAACGCCTCAGGCA GATTCATTGATCTGGGGTGAGAATGAGCAAGCACAAGCACTGGTTAATCAAATTATTTTAAAAGCTCAGGAAGAGAAAAG AACAATTTTAACTGAATTTGAATCTAAACAAGTATTGAGCTTATATGGAATTCCTATTATCCAAACAGAAGTTGCTAAAA ACGCAGCTGAAGCTGTTAAATTAGCCGATCAATTTGGTTATCCAGTTGTTCTCAAGCTTTTTTCTGAAACAATTACTCAC AAAACCGACGTGGGAGGCGTTAAGCTTAATTTAAAAACTTCTCAGGAAGTTTTAATTGCTTACGAAGAAATTTTTCAATC TATATCAAAAATAAAAGGAGTGCAGCATTTTAATGGAGTCACTGTTCAACGTATGATTAAACAATCAGGCTATGAATTGA TTTTAGGTAGTTCAACCGATCCTCAATTTGGACCTGTTTTATTGTTTGGAACTGGGGGACAGCTTGTTGAAGTATTTAAA GATCGTGCTTTAGCGTTACCTCCTCTTAATAGAAATCTTGCTCAACAGCTTATGCAAAAAACAAAAATCTATGAAGCATT GCTTGGTGTAAGGGGGAGAAAGGCAATTAATTTATCTCATTTAGAAGAAATTCTTATTCGGTTTTCTCAACTTATTGTAG GCAATAAGTGGATTAAGGAATGTGATATTAATCCTCTTTTAGTATCTGACAATGAAATTATTGCTTTAGATGGACGTATC ATTTTACATGATAACGATGTTCAAGATCAACAATTACCTAAATTAGCCATCCGTCCTTATCCTTCAAATTACGTTTTAAA AACGGAATTAAATAATCAAAAACAGGTGATTTTAAGACCTATCCGGCCTGAGGACGAACCCCTTATTGTGCAATTTCATC ATGATTTATCTGAGAAAAGTGTACGTCAGCGATACTTAGAATTTATCAGTTTAGATCAACGAGTCACTCATGAACGTTTA ATTCGTATTTGTTTTAATGATTATGACAGAGAATGGGCACTTGTCGCTGAAGTCGTGAATTTTCAACAAAAGCAGATTGT TGGAGTAGGCCGTTTATCTCGCATCCCAGGAACTACTTATGCTCAGCTTACGCTTGCAATTATTGATGCTTATCATTATC AAGGCCTAGGAACTCAATTTATTACACAATTGCTTAAAATTGCCAATCAAGAAAATATTGAGCAAGTTTACGCAAATATT TTAGCTGAGAATGAGGGAATGTTAAAGATTTGTCAGAGACAAGGATTTAAATTAACACCTCTGCCTGATCCAGAAATTAT TCAAGCCTTGTGGTTGAATCCAAAAATGGAAGAGAGCAAATGA
Upstream 100 bases:
>100_bases TATGTTTTTTAATGTGGTTGATGATTTATACACAAGTGAAATGGGAAAATGATTTTTTGAAACTGCCAAAGCATAATTAT GTAAGGAATGGAGAGATTCA
Downstream 100 bases:
>100_bases AGCCTCTTTATTCTTTGTTAGAAAGTCAAATTTTTAATCATTACCAACTTGTTGCTATTAGACAACAAGATATGGAACAA ATCCGTCTTTGGCGCAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 920; Mature: 920
Protein sequence:
>920_residues MNERVLHRTDPSQNFIHRYPQRLDAIFYPKTIAVIGAKDDFGSVGATIMNNLTNGLFKGKIYPINPKRDRILDLISFPSI SSVPEVVDLAIIVTPALTVPKIIKECVNAKVKSAIIISAGFKELGEAGKKLEEEILFYAKQGPLSIIGPNCLGIMNPHTG LNASFAKGLALPGQLAFISQSGAMCTAVLDWSWQEKVGFSSFVSIGSMADVNWGTLIDYFGSDPHTSSLLLYMETIGDAR SFMTAAREVALEKPIIVIKAGRCQAAANAAASHTGSLAGSDEVFDAALERIGVLRVNHISELFSMASVLARQPLPKGPNL SIITNAGGPAVLATDATVLNHAEMAPLTPLTINSLNEFLPQAWSHSNPIDILGDADAKRYAKTVEIIVNDANSDGLLVIL SPQDMTDAKGTAEILTKFAILNEKPLLTSWMGGDSVIEGANILSHAKIPVFNYPDDAAKTFATMWRYSQNLKTLYETPQA DSLIWGENEQAQALVNQIILKAQEEKRTILTEFESKQVLSLYGIPIIQTEVAKNAAEAVKLADQFGYPVVLKLFSETITH KTDVGGVKLNLKTSQEVLIAYEEIFQSISKIKGVQHFNGVTVQRMIKQSGYELILGSSTDPQFGPVLLFGTGGQLVEVFK DRALALPPLNRNLAQQLMQKTKIYEALLGVRGRKAINLSHLEEILIRFSQLIVGNKWIKECDINPLLVSDNEIIALDGRI ILHDNDVQDQQLPKLAIRPYPSNYVLKTELNNQKQVILRPIRPEDEPLIVQFHHDLSEKSVRQRYLEFISLDQRVTHERL IRICFNDYDREWALVAEVVNFQQKQIVGVGRLSRIPGTTYAQLTLAIIDAYHYQGLGTQFITQLLKIANQENIEQVYANI LAENEGMLKICQRQGFKLTPLPDPEIIQALWLNPKMEESK
Sequences:
>Translated_920_residues MNERVLHRTDPSQNFIHRYPQRLDAIFYPKTIAVIGAKDDFGSVGATIMNNLTNGLFKGKIYPINPKRDRILDLISFPSI SSVPEVVDLAIIVTPALTVPKIIKECVNAKVKSAIIISAGFKELGEAGKKLEEEILFYAKQGPLSIIGPNCLGIMNPHTG LNASFAKGLALPGQLAFISQSGAMCTAVLDWSWQEKVGFSSFVSIGSMADVNWGTLIDYFGSDPHTSSLLLYMETIGDAR SFMTAAREVALEKPIIVIKAGRCQAAANAAASHTGSLAGSDEVFDAALERIGVLRVNHISELFSMASVLARQPLPKGPNL SIITNAGGPAVLATDATVLNHAEMAPLTPLTINSLNEFLPQAWSHSNPIDILGDADAKRYAKTVEIIVNDANSDGLLVIL SPQDMTDAKGTAEILTKFAILNEKPLLTSWMGGDSVIEGANILSHAKIPVFNYPDDAAKTFATMWRYSQNLKTLYETPQA DSLIWGENEQAQALVNQIILKAQEEKRTILTEFESKQVLSLYGIPIIQTEVAKNAAEAVKLADQFGYPVVLKLFSETITH KTDVGGVKLNLKTSQEVLIAYEEIFQSISKIKGVQHFNGVTVQRMIKQSGYELILGSSTDPQFGPVLLFGTGGQLVEVFK DRALALPPLNRNLAQQLMQKTKIYEALLGVRGRKAINLSHLEEILIRFSQLIVGNKWIKECDINPLLVSDNEIIALDGRI ILHDNDVQDQQLPKLAIRPYPSNYVLKTELNNQKQVILRPIRPEDEPLIVQFHHDLSEKSVRQRYLEFISLDQRVTHERL IRICFNDYDREWALVAEVVNFQQKQIVGVGRLSRIPGTTYAQLTLAIIDAYHYQGLGTQFITQLLKIANQENIEQVYANI LAENEGMLKICQRQGFKLTPLPDPEIIQALWLNPKMEESK >Mature_920_residues MNERVLHRTDPSQNFIHRYPQRLDAIFYPKTIAVIGAKDDFGSVGATIMNNLTNGLFKGKIYPINPKRDRILDLISFPSI SSVPEVVDLAIIVTPALTVPKIIKECVNAKVKSAIIISAGFKELGEAGKKLEEEILFYAKQGPLSIIGPNCLGIMNPHTG LNASFAKGLALPGQLAFISQSGAMCTAVLDWSWQEKVGFSSFVSIGSMADVNWGTLIDYFGSDPHTSSLLLYMETIGDAR SFMTAAREVALEKPIIVIKAGRCQAAANAAASHTGSLAGSDEVFDAALERIGVLRVNHISELFSMASVLARQPLPKGPNL SIITNAGGPAVLATDATVLNHAEMAPLTPLTINSLNEFLPQAWSHSNPIDILGDADAKRYAKTVEIIVNDANSDGLLVIL SPQDMTDAKGTAEILTKFAILNEKPLLTSWMGGDSVIEGANILSHAKIPVFNYPDDAAKTFATMWRYSQNLKTLYETPQA DSLIWGENEQAQALVNQIILKAQEEKRTILTEFESKQVLSLYGIPIIQTEVAKNAAEAVKLADQFGYPVVLKLFSETITH KTDVGGVKLNLKTSQEVLIAYEEIFQSISKIKGVQHFNGVTVQRMIKQSGYELILGSSTDPQFGPVLLFGTGGQLVEVFK DRALALPPLNRNLAQQLMQKTKIYEALLGVRGRKAINLSHLEEILIRFSQLIVGNKWIKECDINPLLVSDNEIIALDGRI ILHDNDVQDQQLPKLAIRPYPSNYVLKTELNNQKQVILRPIRPEDEPLIVQFHHDLSEKSVRQRYLEFISLDQRVTHERL IRICFNDYDREWALVAEVVNFQQKQIVGVGRLSRIPGTTYAQLTLAIIDAYHYQGLGTQFITQLLKIANQENIEQVYANI LAENEGMLKICQRQGFKLTPLPDPEIIQALWLNPKMEESK
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=881, Percent_Identity=34.2792281498297, Blast_Score=472, Evalue=1e-134,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 101758; Mature: 101758
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERVLHRTDPSQNFIHRYPQRLDAIFYPKTIAVIGAKDDFGSVGATIMNNLTNGLFKGK CCCCCEECCCCCHHHHHHHHHHHHHEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCE IYPINPKRDRILDLISFPSISSVPEVVDLAIIVTPALTVPKIIKECVNAKVKSAIIISAG EEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCEEEEECC FKELGEAGKKLEEEILFYAKQGPLSIIGPNCLGIMNPHTGLNASFAKGLALPGQLAFISQ HHHHHHHHHHHHHHHHEEECCCCCEEECCCEEEECCCCCCCCCHHHCCCCCCCCEEEEEC SGAMCTAVLDWSWQEKVGFSSFVSIGSMADVNWGTLIDYFGSDPHTSSLLLYMETIGDAR CCCEEEEEECCCCHHHCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEEHHHHHHHH SFMTAAREVALEKPIIVIKAGRCQAAANAAASHTGSLAGSDEVFDAALERIGVLRVNHIS HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHH ELFSMASVLARQPLPKGPNLSIITNAGGPAVLATDATVLNHAEMAPLTPLTINSLNEFLP HHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECHHHHCCCCCCCCCCEEHHHHHHHHH QAWSHSNPIDILGDADAKRYAKTVEIIVNDANSDGLLVILSPQDMTDAKGTAEILTKFAI HHCCCCCCEEEECCCCHHHHHHEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHH LNEKPLLTSWMGGDSVIEGANILSHAKIPVFNYPDDAAKTFATMWRYSQNLKTLYETPQA CCCCCCEEEECCCCHHHCCCHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC DSLIWGENEQAQALVNQIILKAQEEKRTILTEFESKQVLSLYGIPIIQTEVAKNAAEAVK CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEHHHHHHHHHHHHH LADQFGYPVVLKLFSETITHKTDVGGVKLNLKTSQEVLIAYEEIFQSISKIKGVQHFNGV HHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHCCCH TVQRMIKQSGYELILGSSTDPQFGPVLLFGTGGQLVEVFKDRALALPPLNRNLAQQLMQK HHHHHHHHCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHCCCEECCCCCHHHHHHHHHH TKIYEALLGVRGRKAINLSHLEEILIRFSQLIVGNKWIKECDINPLLVSDNEIIALDGRI HHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCEEEECCEE ILHDNDVQDQQLPKLAIRPYPSNYVLKTELNNQKQVILRPIRPEDEPLIVQFHHDLSEKS EEECCCCCCHHCCCEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCHHH VRQRYLEFISLDQRVTHERLIRICFNDYDREWALVAEVVNFQQKQIVGVGRLSRIPGTTY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHH AQLTLAIIDAYHYQGLGTQFITQLLKIANQENIEQVYANILAENEGMLKICQRQGFKLTP HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCEECC LPDPEIIQALWLNPKMEESK CCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNERVLHRTDPSQNFIHRYPQRLDAIFYPKTIAVIGAKDDFGSVGATIMNNLTNGLFKGK CCCCCEECCCCCHHHHHHHHHHHHHEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCE IYPINPKRDRILDLISFPSISSVPEVVDLAIIVTPALTVPKIIKECVNAKVKSAIIISAG EEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCEEEEECC FKELGEAGKKLEEEILFYAKQGPLSIIGPNCLGIMNPHTGLNASFAKGLALPGQLAFISQ HHHHHHHHHHHHHHHHEEECCCCCEEECCCEEEECCCCCCCCCHHHCCCCCCCCEEEEEC SGAMCTAVLDWSWQEKVGFSSFVSIGSMADVNWGTLIDYFGSDPHTSSLLLYMETIGDAR CCCEEEEEECCCCHHHCCHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEEHHHHHHHH SFMTAAREVALEKPIIVIKAGRCQAAANAAASHTGSLAGSDEVFDAALERIGVLRVNHIS HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHH ELFSMASVLARQPLPKGPNLSIITNAGGPAVLATDATVLNHAEMAPLTPLTINSLNEFLP HHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECHHHHCCCCCCCCCCEEHHHHHHHHH QAWSHSNPIDILGDADAKRYAKTVEIIVNDANSDGLLVILSPQDMTDAKGTAEILTKFAI HHCCCCCCEEEECCCCHHHHHHEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHH LNEKPLLTSWMGGDSVIEGANILSHAKIPVFNYPDDAAKTFATMWRYSQNLKTLYETPQA CCCCCCEEEECCCCHHHCCCHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC DSLIWGENEQAQALVNQIILKAQEEKRTILTEFESKQVLSLYGIPIIQTEVAKNAAEAVK CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEHHHHHHHHHHHHH LADQFGYPVVLKLFSETITHKTDVGGVKLNLKTSQEVLIAYEEIFQSISKIKGVQHFNGV HHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHCCCH TVQRMIKQSGYELILGSSTDPQFGPVLLFGTGGQLVEVFKDRALALPPLNRNLAQQLMQK HHHHHHHHCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHCCCEECCCCCHHHHHHHHHH TKIYEALLGVRGRKAINLSHLEEILIRFSQLIVGNKWIKECDINPLLVSDNEIIALDGRI HHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCEEEECCEE ILHDNDVQDQQLPKLAIRPYPSNYVLKTELNNQKQVILRPIRPEDEPLIVQFHHDLSEKS EEECCCCCCHHCCCEEECCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCHHH VRQRYLEFISLDQRVTHERLIRICFNDYDREWALVAEVVNFQQKQIVGVGRLSRIPGTTY HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHH AQLTLAIIDAYHYQGLGTQFITQLLKIANQENIEQVYANILAENEGMLKICQRQGFKLTP HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCEECC LPDPEIIQALWLNPKMEESK CCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]