Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447165
Identifier: 46447165
GI number: 46447165
Start: 1834972
End: 1835433
Strand: Reverse
Name: 46447165
Synonym: pc1531
Alternate gene names: NA
Gene position: 1835433-1834972 (Counterclockwise)
Preceding gene: 46447167
Following gene: 46447162
Centisome position: 76.02
GC content: 38.31
Gene sequence:
>462_bases ATGCAAGGTATAGACTATAACCCAGAAAAAAATTGGACTGATTGGGTGGTCAAAATTGGCCATTTCCACCACATTTTTGT TCATTTTCCCATCGCATTGCTTACTATGGCTGTTTTTGCAGAAATTTTATTTGCTTGGTATAGAACTTCTTTTTTTGAGA ATGCAGCTGTTTTTATGATCATTTCTACGGCAGTTTTAGTGCCCATTACTGCTTTGTTGGGATTTGCGCTGTCATTAGGC CAATTTTACCCCGATACACTAAATGATGTATTTGTTTGGCATCGCTATTTTGGCGTAGTCACTGTCATTCTGGCTCTATG GGCATGCCACTTGCGCAATCAATATAGCCGCGATTCTTCCAAGGGATTGTGCTCTTACTATATTTGCTTATTTTTCTCTT TCTTAGTTGTCAATCTTACGGGGTTATTAGGCAATACTCTTACATTGGGATGGAATCTTTAA
Upstream 100 bases:
>100_bases AATAATGAAGAATCGATGGATTTTAATTGGTCTATTACTTTTATCACAGGCCTTTCTTCAAGCTTATGAAGAACATCATC CTAAGGCATTTATCGCTCAA
Downstream 100 bases:
>100_bases TTCTTTTCAAAATAAATTTAATGAAAGCTCTTTATTGTTGCCATTAGTTTTGGATTTTATGCTTCCACCCATCCCCAAGC AATGACGTCTGCTATAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MQGIDYNPEKNWTDWVVKIGHFHHIFVHFPIALLTMAVFAEILFAWYRTSFFENAAVFMIISTAVLVPITALLGFALSLG QFYPDTLNDVFVWHRYFGVVTVILALWACHLRNQYSRDSSKGLCSYYICLFFSFLVVNLTGLLGNTLTLGWNL
Sequences:
>Translated_153_residues MQGIDYNPEKNWTDWVVKIGHFHHIFVHFPIALLTMAVFAEILFAWYRTSFFENAAVFMIISTAVLVPITALLGFALSLG QFYPDTLNDVFVWHRYFGVVTVILALWACHLRNQYSRDSSKGLCSYYICLFFSFLVVNLTGLLGNTLTLGWNL >Mature_153_residues MQGIDYNPEKNWTDWVVKIGHFHHIFVHFPIALLTMAVFAEILFAWYRTSFFENAAVFMIISTAVLVPITALLGFALSLG QFYPDTLNDVFVWHRYFGVVTVILALWACHLRNQYSRDSSKGLCSYYICLFFSFLVVNLTGLLGNTLTLGWNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17568; Mature: 17568
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGIDYNPEKNWTDWVVKIGHFHHIFVHFPIALLTMAVFAEILFAWYRTSFFENAAVFMI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ISTAVLVPITALLGFALSLGQFYPDTLNDVFVWHRYFGVVTVILALWACHLRNQYSRDSS HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KGLCSYYICLFFSFLVVNLTGLLGNTLTLGWNL CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC >Mature Secondary Structure MQGIDYNPEKNWTDWVVKIGHFHHIFVHFPIALLTMAVFAEILFAWYRTSFFENAAVFMI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ISTAVLVPITALLGFALSLGQFYPDTLNDVFVWHRYFGVVTVILALWACHLRNQYSRDSS HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KGLCSYYICLFFSFLVVNLTGLLGNTLTLGWNL CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA