Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447039
Identifier: 46447039
GI number: 46447039
Start: 1682779
End: 1683099
Strand: Reverse
Name: 46447039
Synonym: pc1405
Alternate gene names: NA
Gene position: 1683099-1682779 (Counterclockwise)
Preceding gene: 46447043
Following gene: 46447038
Centisome position: 69.71
GC content: 30.53
Gene sequence:
>321_bases ATGAAATGTAAATTTATCGTTGACACTGTACGTTTTCATGCTATTAAGTTAGGCTTAATAATCGAAAGGCCGAAAAAAAT GATAGATTTCTTAAATATAGACGAAGCTTGTGAATTTTTAAATTTATCCAGGCCAACTCTTTATAGATATGCAAAAGAAG GAAAAATTCCTTCTGTTAAATTTGGTAAGACTTGGCGTTTTCATAAAAAATTACTCGAAGAATGGCTTCTTAATGAAATG AAAGAGGCTGCTCAGAGGAGAGCGAAACAACAACCAGATAATCAATTAAGTGAAGAAAAAGATATTTTTTCAGAAAACTA A
Upstream 100 bases:
>100_bases GTCACAATTTGTCGCATCCAGTCACAATTTGTCGCAAAACAGTTTAGATTATCTTTATTTTATTTTACTCAAACAAGCAT TCAAGGTTAATTAAAAATAA
Downstream 100 bases:
>100_bases CTAAAGAGTAATTTGCCTTTAATGCTTGTAAGCTAAGGCATCTACCTCTAATTATATATTTTAGGGCTAAAATGAATTGA GACGTTGAAAATGCGTAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MKCKFIVDTVRFHAIKLGLIIERPKKMIDFLNIDEACEFLNLSRPTLYRYAKEGKIPSVKFGKTWRFHKKLLEEWLLNEM KEAAQRRAKQQPDNQLSEEKDIFSEN
Sequences:
>Translated_106_residues MKCKFIVDTVRFHAIKLGLIIERPKKMIDFLNIDEACEFLNLSRPTLYRYAKEGKIPSVKFGKTWRFHKKLLEEWLLNEM KEAAQRRAKQQPDNQLSEEKDIFSEN >Mature_106_residues MKCKFIVDTVRFHAIKLGLIIERPKKMIDFLNIDEACEFLNLSRPTLYRYAKEGKIPSVKFGKTWRFHKKLLEEWLLNEM KEAAQRRAKQQPDNQLSEEKDIFSEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12673; Mature: 12673
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCKFIVDTVRFHAIKLGLIIERPKKMIDFLNIDEACEFLNLSRPTLYRYAKEGKIPSVK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCC FGKTWRFHKKLLEEWLLNEMKEAAQRRAKQQPDNQLSEEKDIFSEN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure MKCKFIVDTVRFHAIKLGLIIERPKKMIDFLNIDEACEFLNLSRPTLYRYAKEGKIPSVK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCC FGKTWRFHKKLLEEWLLNEMKEAAQRRAKQQPDNQLSEEKDIFSEN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA