Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446935
Identifier: 46446935
GI number: 46446935
Start: 1557076
End: 1557627
Strand: Reverse
Name: 46446935
Synonym: pc1301
Alternate gene names: NA
Gene position: 1557627-1557076 (Counterclockwise)
Preceding gene: 46446937
Following gene: 46446932
Centisome position: 64.51
GC content: 34.6
Gene sequence:
>552_bases TTGAAAATAGAATTGAGTGAGGTTGAAATGTTATTAAATTTAATTCACAATGGGATCAAGAGCTATTATATGCAGTTACC AGTAAATACTGGGCCTTCTATTTGTCGTAGTGCTCTTTATTCATTTGCTGCTTCATTTATTATTCTCAAGACAAATCCTT CCAGAGCGGCAGCTAATTTAACGCGCCCGCTGGTCCTCTCGGGAGTTGCTGCAACAGCTTCTTTAATGCATGCTTTGACG ACACCTATTTTTAATTATATTTTCGAAAATCAAGACATGAAATGGACGCAGGAAACGTTTCGTATTATCTTCACATTTAC GATGATTCAGCTGGCACTAAACCATCCTTCCTCATCAAAAATTAATCAAATGATCACAAATAAAAAAAGTTTTTACTTTT TTTCTTCAAACCTAATTGGGATCGGGGTTGAATTAATTGCAAAAGGAATAGGATGCATTGATCAAACTTATGCGGATCAT TTTAAAACTTGGACAAATACATTTAATCTAGGATTAACGAAAAGCTCTAATCCAACATATGTCGCCTTTTAA
Upstream 100 bases:
>100_bases AATTCCACCTATTTCATGTGTTTAGAAGCATATGCGATTTTAGTTGTAAACAGTAATCCGAACCTGTAAAGTGTAAAAAA ATTTATCAGAAATAGAAGTT
Downstream 100 bases:
>100_bases GCTTCATTCTTTGAAGAATCTATTTGAGTTTTAAAACGGCGGCTTGCTTGAAATTGTTCAATGACTGGTTCTCCTTCTTG TTGCATCAAATCAAAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKIELSEVEMLLNLIHNGIKSYYMQLPVNTGPSICRSALYSFAASFIILKTNPSRAAANLTRPLVLSGVAATASLMHALT TPIFNYIFENQDMKWTQETFRIIFTFTMIQLALNHPSSSKINQMITNKKSFYFFSSNLIGIGVELIAKGIGCIDQTYADH FKTWTNTFNLGLTKSSNPTYVAF
Sequences:
>Translated_183_residues MKIELSEVEMLLNLIHNGIKSYYMQLPVNTGPSICRSALYSFAASFIILKTNPSRAAANLTRPLVLSGVAATASLMHALT TPIFNYIFENQDMKWTQETFRIIFTFTMIQLALNHPSSSKINQMITNKKSFYFFSSNLIGIGVELIAKGIGCIDQTYADH FKTWTNTFNLGLTKSSNPTYVAF >Mature_183_residues MKIELSEVEMLLNLIHNGIKSYYMQLPVNTGPSICRSALYSFAASFIILKTNPSRAAANLTRPLVLSGVAATASLMHALT TPIFNYIFENQDMKWTQETFRIIFTFTMIQLALNHPSSSKINQMITNKKSFYFFSSNLIGIGVELIAKGIGCIDQTYADH FKTWTNTFNLGLTKSSNPTYVAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20511; Mature: 20511
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIELSEVEMLLNLIHNGIKSYYMQLPVNTGPSICRSALYSFAASFIILKTNPSRAAANL CCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHC TRPLVLSGVAATASLMHALTTPIFNYIFENQDMKWTQETFRIIFTFTMIQLALNHPSSSK CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH INQMITNKKSFYFFSSNLIGIGVELIAKGIGCIDQTYADHFKTWTNTFNLGLTKSSNPTY HHHHHHCCCEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEEEECCCCCCE VAF EEC >Mature Secondary Structure MKIELSEVEMLLNLIHNGIKSYYMQLPVNTGPSICRSALYSFAASFIILKTNPSRAAANL CCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHC TRPLVLSGVAATASLMHALTTPIFNYIFENQDMKWTQETFRIIFTFTMIQLALNHPSSSK CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH INQMITNKKSFYFFSSNLIGIGVELIAKGIGCIDQTYADHFKTWTNTFNLGLTKSSNPTY HHHHHHCCCEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEEEECCCCCCE VAF EEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA