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The map label for this gene is ylbK [H]

Identifier: 46446927

GI number: 46446927

Start: 1550216

End: 1551205

Strand: Reverse

Name: ylbK [H]

Synonym: pc1293

Alternate gene names: 46446927

Gene position: 1551205-1550216 (Counterclockwise)

Preceding gene: 46446930

Following gene: 46446926

Centisome position: 64.25

GC content: 38.89

Gene sequence:

>990_bases
TTGAGATTATCCAATCATTGCTTTTTTATCTATTTAATAAGCTTATTATTATACGGTTGCGAAACCAAATATCATCTTCC
TGATAATCCAAAACCTATTCCCGATTGTCCTCCTTGTCATGAAGTCAGATTAGCCCTTGTTTTAGGTGGAGGTGGGGCGC
GAGGAATGGCTCATGTTGGCGTTTTAGAAGAGTTTGAACAAGCAGGCATTCCTATTGATTTAATTGTTGGTTGTAGTGCG
GGAAGTATTGTTGGAGCACTTTATGCAGATTGCCCAAAAGCTAGTTATCTCAAAAAAATTTTGCGTCCTTTGAAAAAATG
GGATATTTTAGATGTGAGTTTTTGGCAATGCCGTTATGGATTTGTTCAGGGAAGATCTTTGAGGCAATTTTTAAAGAAAA
ACCTTCGTGCCAAATATTTTGAAGAATTGTATATTCCTCTCTGCTGCGCTGCCACTGATTTAATCGAGGGAGAAGTGATT
TGTTTAAATTCAGGCCCTCTTATTCCTGCTGTTCATGCATCTGCTGCTGTTCCCTTTGTATTTTCTCCTGTTTATCTACA
CGATCGATTATTGGTCGATGGTGGAGTCGCAGATCCTGTACCAGTCTGTATGGCAAAAAAGAATCTGGCGCAAGTTGTCG
TTGCGGTAGATTTAAGTGAATTACTTCCCAAAACATGCCCGACAAACTTGTTTGGAATAGCTGCTCGTTCGGCTGAGATC
AAATTTTTATTGCAAAGTGAAAGTTGTGTAAAAGATGCCGACGTAGTGATCCGCCCTGAACTTGGTGAGGTTGGTTTATT
TGATGATCACAAAAATGAACTTGTATACGAAGGTGGAAGAAAAGCCGCTAGAGAAGCAATTCCTCAAATTATCGAACTTT
TATCCCAAAAAGGTTTATGGAAAAGCGAAGAAGGGCCTTGTTTGAATCATTCTTTAAATAATTGTTTAACCATCGAGGTA
GAAAATACCGATGTCTTGACTCCTGAATAA

Upstream 100 bases:

>100_bases
TAGTGCTAACATAACTCTCTTATTCCAATTAATGCTTTTATTAGACGGTCTATCATTTATGACAATAAGTTTATGTCTAT
TTGTAAAAATAAAGAATCGA

Downstream 100 bases:

>100_bases
AATTTGACATCCAAATAATTTAATAGTCATTTTAGATGATTTCAAGTTTATAGTTTAATAGCTTTTGTTTACTAGAAAGG
TGGCATGATGTATATTACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MRLSNHCFFIYLISLLLYGCETKYHLPDNPKPIPDCPPCHEVRLALVLGGGGARGMAHVGVLEEFEQAGIPIDLIVGCSA
GSIVGALYADCPKASYLKKILRPLKKWDILDVSFWQCRYGFVQGRSLRQFLKKNLRAKYFEELYIPLCCAATDLIEGEVI
CLNSGPLIPAVHASAAVPFVFSPVYLHDRLLVDGGVADPVPVCMAKKNLAQVVVAVDLSELLPKTCPTNLFGIAARSAEI
KFLLQSESCVKDADVVIRPELGEVGLFDDHKNELVYEGGRKAAREAIPQIIELLSQKGLWKSEEGPCLNHSLNNCLTIEV
ENTDVLTPE

Sequences:

>Translated_329_residues
MRLSNHCFFIYLISLLLYGCETKYHLPDNPKPIPDCPPCHEVRLALVLGGGGARGMAHVGVLEEFEQAGIPIDLIVGCSA
GSIVGALYADCPKASYLKKILRPLKKWDILDVSFWQCRYGFVQGRSLRQFLKKNLRAKYFEELYIPLCCAATDLIEGEVI
CLNSGPLIPAVHASAAVPFVFSPVYLHDRLLVDGGVADPVPVCMAKKNLAQVVVAVDLSELLPKTCPTNLFGIAARSAEI
KFLLQSESCVKDADVVIRPELGEVGLFDDHKNELVYEGGRKAAREAIPQIIELLSQKGLWKSEEGPCLNHSLNNCLTIEV
ENTDVLTPE
>Mature_329_residues
MRLSNHCFFIYLISLLLYGCETKYHLPDNPKPIPDCPPCHEVRLALVLGGGGARGMAHVGVLEEFEQAGIPIDLIVGCSA
GSIVGALYADCPKASYLKKILRPLKKWDILDVSFWQCRYGFVQGRSLRQFLKKNLRAKYFEELYIPLCCAATDLIEGEVI
CLNSGPLIPAVHASAAVPFVFSPVYLHDRLLVDGGVADPVPVCMAKKNLAQVVVAVDLSELLPKTCPTNLFGIAARSAEI
KFLLQSESCVKDADVVIRPELGEVGLFDDHKNELVYEGGRKAAREAIPQIIELLSQKGLWKSEEGPCLNHSLNNCLTIEV
ENTDVLTPE

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=183, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI116256487, Length=183, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI260656039, Length=183, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI260656037, Length=183, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI260656043, Length=183, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI148727335, Length=184, Percent_Identity=31.5217391304348, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI148727290, Length=184, Percent_Identity=31.5217391304348, Blast_Score=83, Evalue=3e-16,
Organism=Escherichia coli, GI226510936, Length=182, Percent_Identity=34.6153846153846, Blast_Score=112, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI71997289, Length=270, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71997299, Length=270, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6323581, Length=180, Percent_Identity=31.1111111111111, Blast_Score=87, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 36130; Mature: 36130

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSNHCFFIYLISLLLYGCETKYHLPDNPKPIPDCPPCHEVRLALVLGGGGARGMAHVG
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCHHHHH
VLEEFEQAGIPIDLIVGCSAGSIVGALYADCPKASYLKKILRPLKKWDILDVSFWQCRYG
HHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
FVQGRSLRQFLKKNLRAKYFEELYIPLCCAATDLIEGEVICLNSGPLIPAVHASAAVPFV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEHHHCCCCCHH
FSPVYLHDRLLVDGGVADPVPVCMAKKNLAQVVVAVDLSELLPKTCPTNLFGIAARSAEI
CCHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHEECHHHHCCCCCCCCHHEEEECCCEE
KFLLQSESCVKDADVVIRPELGEVGLFDDHKNELVYEGGRKAAREAIPQIIELLSQKGLW
EEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCC
KSEEGPCLNHSLNNCLTIEVENTDVLTPE
CCCCCCCCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MRLSNHCFFIYLISLLLYGCETKYHLPDNPKPIPDCPPCHEVRLALVLGGGGARGMAHVG
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCHHHHH
VLEEFEQAGIPIDLIVGCSAGSIVGALYADCPKASYLKKILRPLKKWDILDVSFWQCRYG
HHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
FVQGRSLRQFLKKNLRAKYFEELYIPLCCAATDLIEGEVICLNSGPLIPAVHASAAVPFV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEHHHCCCCCHH
FSPVYLHDRLLVDGGVADPVPVCMAKKNLAQVVVAVDLSELLPKTCPTNLFGIAARSAEI
CCHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHEECHHHHCCCCCCCCHHEEEECCCEE
KFLLQSESCVKDADVVIRPELGEVGLFDDHKNELVYEGGRKAAREAIPQIIELLSQKGLW
EEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCC
KSEEGPCLNHSLNNCLTIEVENTDVLTPE
CCCCCCCCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]