Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is prpC [H]
Identifier: 46446354
GI number: 46446354
Start: 875458
End: 876237
Strand: Direct
Name: prpC [H]
Synonym: pc0720
Alternate gene names: 46446354
Gene position: 875458-876237 (Clockwise)
Preceding gene: 46446353
Following gene: 46446355
Centisome position: 36.26
GC content: 37.44
Gene sequence:
>780_bases ATGGCTCTTCAAGCAATGTTCTATAAAACCTTAGTTTATGGCATCTCGGATGTTGGTCTTGTTAGGCAAAATAATGAAGA TTCTTGGGGACAAATTCTAGAAGATCATTTTTTTGTTTTAGCAGATGGAATGGGCGGACACCGTGCCGGCGAAGTTGCTT CAAAGGAAGCTGTCAGCCAACTTTGCGCAAAGTTTAAAGAAAAATTCAGTCGTTGCTCAAAAGATATCAAATCTTCTTTC GAAATGATCAAAGAATCCATTCAGGAAGTCAACTACAACATTTATAAAATGGGCCGCGAACAAGAGATACTTCGTGGAAT GGGGACAACATTGTGCTGTGTTTGCCTACATTCGGAAGGGGTGATTTTTGGACACGTAGGAGATAGTCGAATTTATCGAT TGAGAGATAACAATTTAAAGCAAATTACTCAAGATCATTCTCTGCTTCGAGAACTTATTGAATTAGGTCAGTTAAGCGAA CATCAAGCGTGCGAATTTGCTTATAAAAATATCATCACTAAGGCAATTGGTACAGGACCTTTTGTTGAACCTTCCCTCAA AATAGATTCCATTGAAGTAGGTGATGTTATTTTGATGTGTACAGATGGATTGAGTGATTTATTAAGCATTCAAGACATTC AACAAATTTTATCAGATACTCCTGATGATGAAGTTACCAAAAAATTGGTAAAAGTGGCGAAATCGAGAGGAGGACACGAT AACATCACAGTTGTTGTTATTAAAGTTCAGGGAAAATATGAATCGGCGAGTCTATCTTGA
Upstream 100 bases:
>100_bases TGATTAATTTCGAATCAGTCTTAAAAGTATCTCAACGGTATTTTTTGTTAATAGAGATATTAATGATTTTACGACCCCAT TTTAGGTTTTACCTTTTATT
Downstream 100 bases:
>100_bases TTGCAATTCTAGCACCGCGATCGATCCTCGCGTTTTGAAAGTTCTGATCCAAGAACTTCAAGAAGAAGAGGGAAATCCTT CAAGCGTTCATTATCACGGG
Product: putative serine/threonine phosphoprotein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MALQAMFYKTLVYGISDVGLVRQNNEDSWGQILEDHFFVLADGMGGHRAGEVASKEAVSQLCAKFKEKFSRCSKDIKSSF EMIKESIQEVNYNIYKMGREQEILRGMGTTLCCVCLHSEGVIFGHVGDSRIYRLRDNNLKQITQDHSLLRELIELGQLSE HQACEFAYKNIITKAIGTGPFVEPSLKIDSIEVGDVILMCTDGLSDLLSIQDIQQILSDTPDDEVTKKLVKVAKSRGGHD NITVVVIKVQGKYESASLS
Sequences:
>Translated_259_residues MALQAMFYKTLVYGISDVGLVRQNNEDSWGQILEDHFFVLADGMGGHRAGEVASKEAVSQLCAKFKEKFSRCSKDIKSSF EMIKESIQEVNYNIYKMGREQEILRGMGTTLCCVCLHSEGVIFGHVGDSRIYRLRDNNLKQITQDHSLLRELIELGQLSE HQACEFAYKNIITKAIGTGPFVEPSLKIDSIEVGDVILMCTDGLSDLLSIQDIQQILSDTPDDEVTKKLVKVAKSRGGHD NITVVVIKVQGKYESASLS >Mature_258_residues ALQAMFYKTLVYGISDVGLVRQNNEDSWGQILEDHFFVLADGMGGHRAGEVASKEAVSQLCAKFKEKFSRCSKDIKSSFE MIKESIQEVNYNIYKMGREQEILRGMGTTLCCVCLHSEGVIFGHVGDSRIYRLRDNNLKQITQDHSLLRELIELGQLSEH QACEFAYKNIITKAIGTGPFVEPSLKIDSIEVGDVILMCTDGLSDLLSIQDIQQILSDTPDDEVTKKLVKVAKSRGGHDN ITVVVIKVQGKYESASLS
Specific function: Protein phosphatase that dephosphorylates prkC and fusA (elongation factor G). PrpC and prkC are cotranscribed, which suggests that they form a functional couple in vivo, prpC's primary role being possibly to counter the action of prkC. May be involved in
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015655 - InterPro: IPR001932 - InterPro: IPR014045 [H]
Pfam domain/function: PF00481 PP2C [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 28842; Mature: 28711
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQAMFYKTLVYGISDVGLVRQNNEDSWGQILEDHFFVLADGMGGHRAGEVASKEAVSQ CCHHHHHHHHHHHCCHHHHHEECCCCCHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHH LCAKFKEKFSRCSKDIKSSFEMIKESIQEVNYNIYKMGREQEILRGMGTTLCCVCLHSEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCHHHHHHEECCCC VIFGHVGDSRIYRLRDNNLKQITQDHSLLRELIELGQLSEHQACEFAYKNIITKAIGTGP EEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC FVEPSLKIDSIEVGDVILMCTDGLSDLLSIQDIQQILSDTPDDEVTKKLVKVAKSRGGHD CCCCCCEECCEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC NITVVVIKVQGKYESASLS CEEEEEEEEECCCCCCCCC >Mature Secondary Structure ALQAMFYKTLVYGISDVGLVRQNNEDSWGQILEDHFFVLADGMGGHRAGEVASKEAVSQ CHHHHHHHHHHHCCHHHHHEECCCCCHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHH LCAKFKEKFSRCSKDIKSSFEMIKESIQEVNYNIYKMGREQEILRGMGTTLCCVCLHSEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCHHHHHHEECCCC VIFGHVGDSRIYRLRDNNLKQITQDHSLLRELIELGQLSEHQACEFAYKNIITKAIGTGP EEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC FVEPSLKIDSIEVGDVILMCTDGLSDLLSIQDIQQILSDTPDDEVTKKLVKVAKSRGGHD CCCCCCEECCEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC NITVVVIKVQGKYESASLS CEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]