Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446352

Identifier: 46446352

GI number: 46446352

Start: 873090

End: 873965

Strand: Direct

Name: 46446352

Synonym: pc0718

Alternate gene names: NA

Gene position: 873090-873965 (Clockwise)

Preceding gene: 46446351

Following gene: 46446353

Centisome position: 36.16

GC content: 32.31

Gene sequence:

>876_bases
ATGTTAGGTGATGTAGAACTTCAAGAACATATTCAACAACACGTGAATACATTAGCTTTTGGATTAATTTTAGCTATTAT
CACAGGATATTTTGCATGGCATAAAGGGTTTTTTCGCCCTTTTCCCTTTACTTGTGTTCCTGTGATTAGCGGGAAAAGTG
TTTTAAAAGGTTTCATGGCCTTTATTTTAGCAGAATTGATTGTATTTCCAGCCTTGTTTGAAGTGATAAGTCAAATTTTT
TTTGATATTAGCTTACAACATTTATCTAGTATAGCGAAAGGATGGGTTAATGTTCTGATTATATTCGGAGGTTTTTTAGC
TGTCTTAATGGTTTATTTTGACTTGAATCTTAATGTAAGATTGCAAATTTTTAAACAAACTCCCCTTGTTTGGTACAAGC
AATTGAGTATTGGAATACAGGCTTGGCTGATTAGTTATCCTTTTGTGATGGTGTTAAGCCAACTGCTTGCAATTTTGATG
TTAGTGATTTTTAAACAACCGGCTACAGAACAAATTGTTGTAGAAAATTTTAAACGCATTCTTTCAAGTCCTCTTTTAGT
TTCAGTAACAGCTCTGGAAATTATTGTCCTTGTGCCTATTACAGAGGAATTTCTGTTTAGGGGGCTTTTACAAAATTGGT
TGAAAAGCCAATTCAAACATACTTCTTTAGCAATAGGAATAACCTCTTTGATTTTCGCCCTGTTTCATTTTTCTACTAAA
CAAGGAATTACAAATATTGAATTGTTATTTTCTCTGTTTATTCTTTCTAGTTTTTTGGGATTCATCTACGAAAAACAACG
TTCGTTATGGGCATCTATTGGACTTCACGGATTTTTTAATATGATGAGCGTCATTTTTATTTTAATGTCGAAATAA

Upstream 100 bases:

>100_bases
AACATTCACAGAATAATTTATATAAAAGAGTTTTTTGATAAAGGTCAACCCACACTATAATTAAATGCAATGAACCCATA
ACTACAAACGAGATTGACAG

Downstream 100 bases:

>100_bases
AAGGTAAACAAATGAAATATATGCGAGTGAGTATATTTTTGTTGATTTCTATGATGAGTTATCTTTTTTCTCAAGAACAA
GAGATTTTAACAAATGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MLGDVELQEHIQQHVNTLAFGLILAIITGYFAWHKGFFRPFPFTCVPVISGKSVLKGFMAFILAELIVFPALFEVISQIF
FDISLQHLSSIAKGWVNVLIIFGGFLAVLMVYFDLNLNVRLQIFKQTPLVWYKQLSIGIQAWLISYPFVMVLSQLLAILM
LVIFKQPATEQIVVENFKRILSSPLLVSVTALEIIVLVPITEEFLFRGLLQNWLKSQFKHTSLAIGITSLIFALFHFSTK
QGITNIELLFSLFILSSFLGFIYEKQRSLWASIGLHGFFNMMSVIFILMSK

Sequences:

>Translated_291_residues
MLGDVELQEHIQQHVNTLAFGLILAIITGYFAWHKGFFRPFPFTCVPVISGKSVLKGFMAFILAELIVFPALFEVISQIF
FDISLQHLSSIAKGWVNVLIIFGGFLAVLMVYFDLNLNVRLQIFKQTPLVWYKQLSIGIQAWLISYPFVMVLSQLLAILM
LVIFKQPATEQIVVENFKRILSSPLLVSVTALEIIVLVPITEEFLFRGLLQNWLKSQFKHTSLAIGITSLIFALFHFSTK
QGITNIELLFSLFILSSFLGFIYEKQRSLWASIGLHGFFNMMSVIFILMSK
>Mature_291_residues
MLGDVELQEHIQQHVNTLAFGLILAIITGYFAWHKGFFRPFPFTCVPVISGKSVLKGFMAFILAELIVFPALFEVISQIF
FDISLQHLSSIAKGWVNVLIIFGGFLAVLMVYFDLNLNVRLQIFKQTPLVWYKQLSIGIQAWLISYPFVMVLSQLLAILM
LVIFKQPATEQIVVENFKRILSSPLLVSVTALEIIVLVPITEEFLFRGLLQNWLKSQFKHTSLAIGITSLIFALFHFSTK
QGITNIELLFSLFILSSFLGFIYEKQRSLWASIGLHGFFNMMSVIFILMSK

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33137; Mature: 33137

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGDVELQEHIQQHVNTLAFGLILAIITGYFAWHKGFFRPFPFTCVPVISGKSVLKGFMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHH
FILAELIVFPALFEVISQIFFDISLQHLSSIAKGWVNVLIIFGGFLAVLMVYFDLNLNVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LQIFKQTPLVWYKQLSIGIQAWLISYPFVMVLSQLLAILMLVIFKQPATEQIVVENFKRI
EEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LSSPLLVSVTALEIIVLVPITEEFLFRGLLQNWLKSQFKHTSLAIGITSLIFALFHFSTK
HCCCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGITNIELLFSLFILSSFLGFIYEKQRSLWASIGLHGFFNMMSVIFILMSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLGDVELQEHIQQHVNTLAFGLILAIITGYFAWHKGFFRPFPFTCVPVISGKSVLKGFMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHH
FILAELIVFPALFEVISQIFFDISLQHLSSIAKGWVNVLIIFGGFLAVLMVYFDLNLNVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LQIFKQTPLVWYKQLSIGIQAWLISYPFVMVLSQLLAILMLVIFKQPATEQIVVENFKRI
EEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LSSPLLVSVTALEIIVLVPITEEFLFRGLLQNWLKSQFKHTSLAIGITSLIFALFHFSTK
HCCCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGITNIELLFSLFILSSFLGFIYEKQRSLWASIGLHGFFNMMSVIFILMSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA