Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446352
Identifier: 46446352
GI number: 46446352
Start: 873090
End: 873965
Strand: Direct
Name: 46446352
Synonym: pc0718
Alternate gene names: NA
Gene position: 873090-873965 (Clockwise)
Preceding gene: 46446351
Following gene: 46446353
Centisome position: 36.16
GC content: 32.31
Gene sequence:
>876_bases ATGTTAGGTGATGTAGAACTTCAAGAACATATTCAACAACACGTGAATACATTAGCTTTTGGATTAATTTTAGCTATTAT CACAGGATATTTTGCATGGCATAAAGGGTTTTTTCGCCCTTTTCCCTTTACTTGTGTTCCTGTGATTAGCGGGAAAAGTG TTTTAAAAGGTTTCATGGCCTTTATTTTAGCAGAATTGATTGTATTTCCAGCCTTGTTTGAAGTGATAAGTCAAATTTTT TTTGATATTAGCTTACAACATTTATCTAGTATAGCGAAAGGATGGGTTAATGTTCTGATTATATTCGGAGGTTTTTTAGC TGTCTTAATGGTTTATTTTGACTTGAATCTTAATGTAAGATTGCAAATTTTTAAACAAACTCCCCTTGTTTGGTACAAGC AATTGAGTATTGGAATACAGGCTTGGCTGATTAGTTATCCTTTTGTGATGGTGTTAAGCCAACTGCTTGCAATTTTGATG TTAGTGATTTTTAAACAACCGGCTACAGAACAAATTGTTGTAGAAAATTTTAAACGCATTCTTTCAAGTCCTCTTTTAGT TTCAGTAACAGCTCTGGAAATTATTGTCCTTGTGCCTATTACAGAGGAATTTCTGTTTAGGGGGCTTTTACAAAATTGGT TGAAAAGCCAATTCAAACATACTTCTTTAGCAATAGGAATAACCTCTTTGATTTTCGCCCTGTTTCATTTTTCTACTAAA CAAGGAATTACAAATATTGAATTGTTATTTTCTCTGTTTATTCTTTCTAGTTTTTTGGGATTCATCTACGAAAAACAACG TTCGTTATGGGCATCTATTGGACTTCACGGATTTTTTAATATGATGAGCGTCATTTTTATTTTAATGTCGAAATAA
Upstream 100 bases:
>100_bases AACATTCACAGAATAATTTATATAAAAGAGTTTTTTGATAAAGGTCAACCCACACTATAATTAAATGCAATGAACCCATA ACTACAAACGAGATTGACAG
Downstream 100 bases:
>100_bases AAGGTAAACAAATGAAATATATGCGAGTGAGTATATTTTTGTTGATTTCTATGATGAGTTATCTTTTTTCTCAAGAACAA GAGATTTTAACAAATGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MLGDVELQEHIQQHVNTLAFGLILAIITGYFAWHKGFFRPFPFTCVPVISGKSVLKGFMAFILAELIVFPALFEVISQIF FDISLQHLSSIAKGWVNVLIIFGGFLAVLMVYFDLNLNVRLQIFKQTPLVWYKQLSIGIQAWLISYPFVMVLSQLLAILM LVIFKQPATEQIVVENFKRILSSPLLVSVTALEIIVLVPITEEFLFRGLLQNWLKSQFKHTSLAIGITSLIFALFHFSTK QGITNIELLFSLFILSSFLGFIYEKQRSLWASIGLHGFFNMMSVIFILMSK
Sequences:
>Translated_291_residues MLGDVELQEHIQQHVNTLAFGLILAIITGYFAWHKGFFRPFPFTCVPVISGKSVLKGFMAFILAELIVFPALFEVISQIF FDISLQHLSSIAKGWVNVLIIFGGFLAVLMVYFDLNLNVRLQIFKQTPLVWYKQLSIGIQAWLISYPFVMVLSQLLAILM LVIFKQPATEQIVVENFKRILSSPLLVSVTALEIIVLVPITEEFLFRGLLQNWLKSQFKHTSLAIGITSLIFALFHFSTK QGITNIELLFSLFILSSFLGFIYEKQRSLWASIGLHGFFNMMSVIFILMSK >Mature_291_residues MLGDVELQEHIQQHVNTLAFGLILAIITGYFAWHKGFFRPFPFTCVPVISGKSVLKGFMAFILAELIVFPALFEVISQIF FDISLQHLSSIAKGWVNVLIIFGGFLAVLMVYFDLNLNVRLQIFKQTPLVWYKQLSIGIQAWLISYPFVMVLSQLLAILM LVIFKQPATEQIVVENFKRILSSPLLVSVTALEIIVLVPITEEFLFRGLLQNWLKSQFKHTSLAIGITSLIFALFHFSTK QGITNIELLFSLFILSSFLGFIYEKQRSLWASIGLHGFFNMMSVIFILMSK
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33137; Mature: 33137
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGDVELQEHIQQHVNTLAFGLILAIITGYFAWHKGFFRPFPFTCVPVISGKSVLKGFMA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHH FILAELIVFPALFEVISQIFFDISLQHLSSIAKGWVNVLIIFGGFLAVLMVYFDLNLNVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LQIFKQTPLVWYKQLSIGIQAWLISYPFVMVLSQLLAILMLVIFKQPATEQIVVENFKRI EEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LSSPLLVSVTALEIIVLVPITEEFLFRGLLQNWLKSQFKHTSLAIGITSLIFALFHFSTK HCCCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGITNIELLFSLFILSSFLGFIYEKQRSLWASIGLHGFFNMMSVIFILMSK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLGDVELQEHIQQHVNTLAFGLILAIITGYFAWHKGFFRPFPFTCVPVISGKSVLKGFMA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHH FILAELIVFPALFEVISQIFFDISLQHLSSIAKGWVNVLIIFGGFLAVLMVYFDLNLNVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LQIFKQTPLVWYKQLSIGIQAWLISYPFVMVLSQLLAILMLVIFKQPATEQIVVENFKRI EEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LSSPLLVSVTALEIIVLVPITEEFLFRGLLQNWLKSQFKHTSLAIGITSLIFALFHFSTK HCCCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGITNIELLFSLFILSSFLGFIYEKQRSLWASIGLHGFFNMMSVIFILMSK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA