Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is yuxK [H]
Identifier: 46446325
GI number: 46446325
Start: 841764
End: 842180
Strand: Direct
Name: yuxK [H]
Synonym: pc0691
Alternate gene names: 46446325
Gene position: 841764-842180 (Clockwise)
Preceding gene: 46446324
Following gene: 46446326
Centisome position: 34.86
GC content: 35.49
Gene sequence:
>417_bases ATGAATGAATGCAAACATTTAGTTTTTTATGATGGAGAATGTGGACTTTGTGATTCACTTGTTCAGTTTTTGATTAAAAT CGATCATGATAAACAATTTGCCTTTGCTCCCTTACAAGGTGAAACTGCCAAGCAGCGCCTTTCTCACTTACCTTTTACCG CTAGAAATATTGACACTCTCATTTTCATTGAAAATTTTAAAAGTCCTCATTTCAAAATCTGTATTAGCAGTCAGGCCGTT TTTAGGATTTGTTGGTTAATTGGAAAAGGATGGACCTTTCTAGGGTTGTTATATTTTCTCCCTTCTTTTTTATTTGATTG GATCTATCGTTTAGTGGCTCGTTATCGCCATCGCTTCATGTCTAAAGCAGAGTGCCCTTTGCCTTTATCAGATCAAAAAG ATCGTTTCTTTCCTTAA
Upstream 100 bases:
>100_bases AAATTAAAATTAAAGTGCAAAGTGGTCATTGCTCAGACGATGAGGTGATGGAGTTGATTAAACAGTTTGATGAGTTAAAA CGAAATCCCCCTATTGTCAA
Downstream 100 bases:
>100_bases AAATAAGTTGTCTCTAAATGATATTTAAATAAGTTTACACGTACTAATAGGATCGGTTTCAAAAATCTACATTAGGTAAA ATTGGTATAAAAAAATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MNECKHLVFYDGECGLCDSLVQFLIKIDHDKQFAFAPLQGETAKQRLSHLPFTARNIDTLIFIENFKSPHFKICISSQAV FRICWLIGKGWTFLGLLYFLPSFLFDWIYRLVARYRHRFMSKAECPLPLSDQKDRFFP
Sequences:
>Translated_138_residues MNECKHLVFYDGECGLCDSLVQFLIKIDHDKQFAFAPLQGETAKQRLSHLPFTARNIDTLIFIENFKSPHFKICISSQAV FRICWLIGKGWTFLGLLYFLPSFLFDWIYRLVARYRHRFMSKAECPLPLSDQKDRFFP >Mature_138_residues MNECKHLVFYDGECGLCDSLVQFLIKIDHDKQFAFAPLQGETAKQRLSHLPFTARNIDTLIFIENFKSPHFKICISSQAV FRICWLIGKGWTFLGLLYFLPSFLFDWIYRLVARYRHRFMSKAECPLPLSDQKDRFFP
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCC thiol-disulfide oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007263 [H]
Pfam domain/function: PF04134 DUF393 [H]
EC number: NA
Molecular weight: Translated: 16304; Mature: 16304
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNECKHLVFYDGECGLCDSLVQFLIKIDHDKQFAFAPLQGETAKQRLSHLPFTARNIDTL CCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCEEE IFIENFKSPHFKICISSQAVFRICWLIGKGWTFLGLLYFLPSFLFDWIYRLVARYRHRFM EEEECCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKAECPLPLSDQKDRFFP CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNECKHLVFYDGECGLCDSLVQFLIKIDHDKQFAFAPLQGETAKQRLSHLPFTARNIDTL CCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCEEE IFIENFKSPHFKICISSQAVFRICWLIGKGWTFLGLLYFLPSFLFDWIYRLVARYRHRFM EEEECCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKAECPLPLSDQKDRFFP CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7961491; 9274030; 9384377 [H]