Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446166

Identifier: 46446166

GI number: 46446166

Start: 664721

End: 665398

Strand: Reverse

Name: 46446166

Synonym: pc0532

Alternate gene names: NA

Gene position: 665398-664721 (Counterclockwise)

Preceding gene: 46446167

Following gene: 46446164

Centisome position: 27.56

GC content: 35.84

Gene sequence:

>678_bases
ATGAAAATAGAAAAAGTATTAAGTTATGCTGAAGAGTATTTAAGTATGGGATCTGGCCCTGCTATAATAGGGATCATTCC
TGGAATCGTCAAGGTTGGAATGGGAGGAACTCAGTGCTTATCAGGACTTGCTTGTACAATTATTTTTTCAACTGCCACAA
TTTTTGATTCTAATTACACACCTTTGAGGAATCGATCAGCAAGCCATATTATTCACGGCGCTGCTAATATCATTGCTGGA
ATAATAGAAGCTATTCCTTTTGTAGGTTTTGTTGGATTTGTTGTTAGAATGGTCAAAAGTAAAGTAGGGGGAAAAAAAGT
AGATGGGATGAAAGCTATCTATAATATGAGAAGAGCGGCAGCAACCGCAAATCCAACCTATCAGGCAATTTGGAATCAGC
GATTTAAAAATGATCCTAATAACTATGCCCTTGAATCGCCTAAAAACTATGTTCTTGTATCCCCTAACAATTTCAAATTC
ATAGGTTATAAAACATTACAAAATGACTCGGACACTTATTACCAAGAAGAAGGGGCTTATTATCGCTCTCTTAATTTTCC
AAAAGAGGTAATTGATCCTAATACTATCGTTCATGTTTCGAACAAAGAACAATTTAAAAAAACCCATGCAAATGCGAGAT
TTTTTGATGCTCCTTGGGGTCCTGTTCTAATGGTTTAA

Upstream 100 bases:

>100_bases
TTATCAATTTAATAATTAAGAAATTTGATAAATATTTATAATAGAATTAATTGATAAATACTCAAATTTATAAAAAATTT
TAACCAACAAAGAAAATAAA

Downstream 100 bases:

>100_bases
AAATTCCTTGATTATCTATTGATTATCTATATGATAAAATTTTCTTTATTTTTTAATATCTCTTGAATCAATTTGATGGC
CATCGGCATTATTAGATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKIEKVLSYAEEYLSMGSGPAIIGIIPGIVKVGMGGTQCLSGLACTIIFSTATIFDSNYTPLRNRSASHIIHGAANIIAG
IIEAIPFVGFVGFVVRMVKSKVGGKKVDGMKAIYNMRRAAATANPTYQAIWNQRFKNDPNNYALESPKNYVLVSPNNFKF
IGYKTLQNDSDTYYQEEGAYYRSLNFPKEVIDPNTIVHVSNKEQFKKTHANARFFDAPWGPVLMV

Sequences:

>Translated_225_residues
MKIEKVLSYAEEYLSMGSGPAIIGIIPGIVKVGMGGTQCLSGLACTIIFSTATIFDSNYTPLRNRSASHIIHGAANIIAG
IIEAIPFVGFVGFVVRMVKSKVGGKKVDGMKAIYNMRRAAATANPTYQAIWNQRFKNDPNNYALESPKNYVLVSPNNFKF
IGYKTLQNDSDTYYQEEGAYYRSLNFPKEVIDPNTIVHVSNKEQFKKTHANARFFDAPWGPVLMV
>Mature_225_residues
MKIEKVLSYAEEYLSMGSGPAIIGIIPGIVKVGMGGTQCLSGLACTIIFSTATIFDSNYTPLRNRSASHIIHGAANIIAG
IIEAIPFVGFVGFVVRMVKSKVGGKKVDGMKAIYNMRRAAATANPTYQAIWNQRFKNDPNNYALESPKNYVLVSPNNFKF
IGYKTLQNDSDTYYQEEGAYYRSLNFPKEVIDPNTIVHVSNKEQFKKTHANARFFDAPWGPVLMV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24903; Mature: 24903

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEKVLSYAEEYLSMGSGPAIIGIIPGIVKVGMGGTQCLSGLACTIIFSTATIFDSNYT
CCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PLRNRSASHIIHGAANIIAGIIEAIPFVGFVGFVVRMVKSKVGGKKVDGMKAIYNMRRAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ATANPTYQAIWNQRFKNDPNNYALESPKNYVLVSPNNFKFIGYKTLQNDSDTYYQEEGAY
HCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCHHHCCCCE
YRSLNFPKEVIDPNTIVHVSNKEQFKKTHANARFFDAPWGPVLMV
EECCCCCHHHCCCCEEEEECCHHHHHHHHCCCEEEECCCCCEEEC
>Mature Secondary Structure
MKIEKVLSYAEEYLSMGSGPAIIGIIPGIVKVGMGGTQCLSGLACTIIFSTATIFDSNYT
CCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PLRNRSASHIIHGAANIIAGIIEAIPFVGFVGFVVRMVKSKVGGKKVDGMKAIYNMRRAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ATANPTYQAIWNQRFKNDPNNYALESPKNYVLVSPNNFKFIGYKTLQNDSDTYYQEEGAY
HCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCHHHCCCCE
YRSLNFPKEVIDPNTIVHVSNKEQFKKTHANARFFDAPWGPVLMV
EECCCCCHHHCCCCEEEEECCHHHHHHHHCCCEEEECCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA