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The map label for this gene is alkA

Identifier: 46446137

GI number: 46446137

Start: 641984

End: 642397

Strand: Direct

Name: alkA

Synonym: pc0503

Alternate gene names: NA

Gene position: 641984-642397 (Clockwise)

Preceding gene: 46446135

Following gene: 46446138

Centisome position: 26.59

GC content: 31.4

Gene sequence:

>414_bases
TTGACGCAAAAGTTTGAAAGCTCTTTTGAAGAAAATGGTCATATAATTTATTCTTTTCCAGAAACTTGTGTAATTATGAA
GTGTACAATAAAAGAATTGATGGCTTTAGGGTTTAGCCAACATAAAAGTGGAACTTTGATATTGATTGCTTCAACTATAG
TCAATGAAAAAACCTTTTGTGATCTTGATAAATTATCTAATGAAGAAATCATCAAATTATTATGTGGCATTAAAGGCATT
GGACGATGGTCTGCTGAATATACTTTACTGAGAGGTCTTGGAAAAACAGAGATTCTACCAGGTGACGACGTTGCAATTAA
TAAAAGTGTTATAAATCTTCTTAAGCTTCGGAAAAACCAGATTTTAACAGGATTAAAAAAGTTGAAAAGGAATGGAATCC
TTATGCAGGATTGA

Upstream 100 bases:

>100_bases
ACAATGCTTTTAAATCATGTTGAGGTCTTTTATCATTCAAATTTTATGTATCTTGTTTAAGCCTAAACACCTAAACACAA
AGTTGAGGTTATTAAACAAT

Downstream 100 bases:

>100_bases
TTTATTTTCATTTTCTTCTCGAAAAATTATCGAAGCAAGGAGTCATAGAATAGAGTTGAAAATTAATCTTAAAAACAGGA
AAAAAGAGAAGAAGCACTTT

Product: putative DNA-3-methyladenine glycosylase II

Products: NA

Alternate protein names: DNA-3-Methyladenine Glycosylase

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTQKFESSFEENGHIIYSFPETCVIMKCTIKELMALGFSQHKSGTLILIASTIVNEKTFCDLDKLSNEEIIKLLCGIKGI
GRWSAEYTLLRGLGKTEILPGDDVAINKSVINLLKLRKNQILTGLKKLKRNGILMQD

Sequences:

>Translated_137_residues
MTQKFESSFEENGHIIYSFPETCVIMKCTIKELMALGFSQHKSGTLILIASTIVNEKTFCDLDKLSNEEIIKLLCGIKGI
GRWSAEYTLLRGLGKTEILPGDDVAINKSVINLLKLRKNQILTGLKKLKRNGILMQD
>Mature_136_residues
TQKFESSFEENGHIIYSFPETCVIMKCTIKELMALGFSQHKSGTLILIASTIVNEKTFCDLDKLSNEEIIKLLCGIKGIG
RWSAEYTLLRGLGKTEILPGDDVAINKSVINLLKLRKNQILTGLKKLKRNGILMQD

Specific function: Unknown

COG id: COG0122

COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15360; Mature: 15229

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKFESSFEENGHIIYSFPETCVIMKCTIKELMALGFSQHKSGTLILIASTIVNEKTFC
CCCCHHHHHCCCCCEEEECCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCHHC
DLDKLSNEEIIKLLCGIKGIGRWSAEYTLLRGLGKTEILPGDDVAINKSVINLLKLRKNQ
CHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ILTGLKKLKRNGILMQD
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TQKFESSFEENGHIIYSFPETCVIMKCTIKELMALGFSQHKSGTLILIASTIVNEKTFC
CCCHHHHHCCCCCEEEECCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEEHHHHCCCHHC
DLDKLSNEEIIKLLCGIKGIGRWSAEYTLLRGLGKTEILPGDDVAINKSVINLLKLRKNQ
CHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ILTGLKKLKRNGILMQD
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA