Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446074

Identifier: 46446074

GI number: 46446074

Start: 568827

End: 569585

Strand: Direct

Name: 46446074

Synonym: pc0440

Alternate gene names: NA

Gene position: 568827-569585 (Clockwise)

Preceding gene: 46446073

Following gene: 46446080

Centisome position: 23.56

GC content: 34.91

Gene sequence:

>759_bases
ATGACTAGAATTTCTGAAAATTTTCACGCATGGGGTGCACACCTTTCTCCAATCGCTATCCAAGCAAAAGAAATTGGGTT
AAAAGCAATAGTTATAATTGATCCAGTTGTTGCTGAAATGGTGAAAATAGTTGCTGTAAAAATTTTGTTGGAAGAAGTAA
CAAAAGCCCTTTTTTCTAGCAAACAATTACCAGGGATTAATGTAAGATTGATCACAGTTGTGGGGCCCGTTGTTGAAGAA
GTTTTTTTTCGTGGGATGCTACAGCGAGGAATTGGTATAACTCAAGCGGGATGGAATCGATTTGTGATTAAAAGGGAGTT
GACAAAGCAAGAAATAATGTCCCAAAGAGCTTGGCGTATCCATGTGACAGCTATTATTTTTGGATTAGCTCATGTTAATA
ATTCTCATAGTAATTATGTTAGTATGTTCTTTCAAATAAACTGGTGTTATATGGGAGGTGTTGCATATGGGTATCTCAGT
GAAAAATATCAAACTCTTTCGGTTAGTATATTGGCACACAGCATCAATAATATTTTGGCGATTTCGTTGATGGTTTATCC
TAAATTTAAAGAGTTAACGCTACTTGCCCTAGTGGCTAATAACCTAGCTTTTTGTGTTTTAGGCACGAGTTCAAATAATG
TAATTGATGAAACGATGGTAGCAACTAAAGCTTACTTATCACATTTATATCAGCGTTGTTTTGTTTCTTTGTCAAATTTT
TCAAAAAAATCTTTCTCACAAACCGTCGAGATTATCTAA

Upstream 100 bases:

>100_bases
AAACGAAAGCTTCTTTATCTATTTTTATGATTGTTACTTTTTTTATGATTGTTACTTTTGCACTTAAATAGCTATTAATA
AAAAAGCTTTAGGAAAATGT

Downstream 100 bases:

>100_bases
ATAATAAAAGCAAAAAAACTGATTATTTTAAGAAATTTTAACTTTATCATTTTTATGTTTTAGAATGATTTTAAAACATG
TATGGGGCCGGATAGGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTRISENFHAWGAHLSPIAIQAKEIGLKAIVIIDPVVAEMVKIVAVKILLEEVTKALFSSKQLPGINVRLITVVGPVVEE
VFFRGMLQRGIGITQAGWNRFVIKRELTKQEIMSQRAWRIHVTAIIFGLAHVNNSHSNYVSMFFQINWCYMGGVAYGYLS
EKYQTLSVSILAHSINNILAISLMVYPKFKELTLLALVANNLAFCVLGTSSNNVIDETMVATKAYLSHLYQRCFVSLSNF
SKKSFSQTVEII

Sequences:

>Translated_252_residues
MTRISENFHAWGAHLSPIAIQAKEIGLKAIVIIDPVVAEMVKIVAVKILLEEVTKALFSSKQLPGINVRLITVVGPVVEE
VFFRGMLQRGIGITQAGWNRFVIKRELTKQEIMSQRAWRIHVTAIIFGLAHVNNSHSNYVSMFFQINWCYMGGVAYGYLS
EKYQTLSVSILAHSINNILAISLMVYPKFKELTLLALVANNLAFCVLGTSSNNVIDETMVATKAYLSHLYQRCFVSLSNF
SKKSFSQTVEII
>Mature_251_residues
TRISENFHAWGAHLSPIAIQAKEIGLKAIVIIDPVVAEMVKIVAVKILLEEVTKALFSSKQLPGINVRLITVVGPVVEEV
FFRGMLQRGIGITQAGWNRFVIKRELTKQEIMSQRAWRIHVTAIIFGLAHVNNSHSNYVSMFFQINWCYMGGVAYGYLSE
KYQTLSVSILAHSINNILAISLMVYPKFKELTLLALVANNLAFCVLGTSSNNVIDETMVATKAYLSHLYQRCFVSLSNFS
KKSFSQTVEII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28215; Mature: 28083

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRISENFHAWGAHLSPIAIQAKEIGLKAIVIIDPVVAEMVKIVAVKILLEEVTKALFSS
CCCCCCCCHHCCCCCCCEEEEHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCC
KQLPGINVRLITVVGPVVEEVFFRGMLQRGIGITQAGWNRFVIKRELTKQEIMSQRAWRI
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEE
HVTAIIFGLAHVNNSHSNYVSMFFQINWCYMGGVAYGYLSEKYQTLSVSILAHSINNILA
EHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHE
ISLMVYPKFKELTLLALVANNLAFCVLGTSSNNVIDETMVATKAYLSHLYQRCFVSLSNF
EEEEECCCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
SKKSFSQTVEII
CHHHHHHHHCCC
>Mature Secondary Structure 
TRISENFHAWGAHLSPIAIQAKEIGLKAIVIIDPVVAEMVKIVAVKILLEEVTKALFSS
CCCCCCCHHCCCCCCCEEEEHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCC
KQLPGINVRLITVVGPVVEEVFFRGMLQRGIGITQAGWNRFVIKRELTKQEIMSQRAWRI
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEE
HVTAIIFGLAHVNNSHSNYVSMFFQINWCYMGGVAYGYLSEKYQTLSVSILAHSINNILA
EHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHE
ISLMVYPKFKELTLLALVANNLAFCVLGTSSNNVIDETMVATKAYLSHLYQRCFVSLSNF
EEEEECCCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
SKKSFSQTVEII
CHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA