Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446074
Identifier: 46446074
GI number: 46446074
Start: 568827
End: 569585
Strand: Direct
Name: 46446074
Synonym: pc0440
Alternate gene names: NA
Gene position: 568827-569585 (Clockwise)
Preceding gene: 46446073
Following gene: 46446080
Centisome position: 23.56
GC content: 34.91
Gene sequence:
>759_bases ATGACTAGAATTTCTGAAAATTTTCACGCATGGGGTGCACACCTTTCTCCAATCGCTATCCAAGCAAAAGAAATTGGGTT AAAAGCAATAGTTATAATTGATCCAGTTGTTGCTGAAATGGTGAAAATAGTTGCTGTAAAAATTTTGTTGGAAGAAGTAA CAAAAGCCCTTTTTTCTAGCAAACAATTACCAGGGATTAATGTAAGATTGATCACAGTTGTGGGGCCCGTTGTTGAAGAA GTTTTTTTTCGTGGGATGCTACAGCGAGGAATTGGTATAACTCAAGCGGGATGGAATCGATTTGTGATTAAAAGGGAGTT GACAAAGCAAGAAATAATGTCCCAAAGAGCTTGGCGTATCCATGTGACAGCTATTATTTTTGGATTAGCTCATGTTAATA ATTCTCATAGTAATTATGTTAGTATGTTCTTTCAAATAAACTGGTGTTATATGGGAGGTGTTGCATATGGGTATCTCAGT GAAAAATATCAAACTCTTTCGGTTAGTATATTGGCACACAGCATCAATAATATTTTGGCGATTTCGTTGATGGTTTATCC TAAATTTAAAGAGTTAACGCTACTTGCCCTAGTGGCTAATAACCTAGCTTTTTGTGTTTTAGGCACGAGTTCAAATAATG TAATTGATGAAACGATGGTAGCAACTAAAGCTTACTTATCACATTTATATCAGCGTTGTTTTGTTTCTTTGTCAAATTTT TCAAAAAAATCTTTCTCACAAACCGTCGAGATTATCTAA
Upstream 100 bases:
>100_bases AAACGAAAGCTTCTTTATCTATTTTTATGATTGTTACTTTTTTTATGATTGTTACTTTTGCACTTAAATAGCTATTAATA AAAAAGCTTTAGGAAAATGT
Downstream 100 bases:
>100_bases ATAATAAAAGCAAAAAAACTGATTATTTTAAGAAATTTTAACTTTATCATTTTTATGTTTTAGAATGATTTTAAAACATG TATGGGGCCGGATAGGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTRISENFHAWGAHLSPIAIQAKEIGLKAIVIIDPVVAEMVKIVAVKILLEEVTKALFSSKQLPGINVRLITVVGPVVEE VFFRGMLQRGIGITQAGWNRFVIKRELTKQEIMSQRAWRIHVTAIIFGLAHVNNSHSNYVSMFFQINWCYMGGVAYGYLS EKYQTLSVSILAHSINNILAISLMVYPKFKELTLLALVANNLAFCVLGTSSNNVIDETMVATKAYLSHLYQRCFVSLSNF SKKSFSQTVEII
Sequences:
>Translated_252_residues MTRISENFHAWGAHLSPIAIQAKEIGLKAIVIIDPVVAEMVKIVAVKILLEEVTKALFSSKQLPGINVRLITVVGPVVEE VFFRGMLQRGIGITQAGWNRFVIKRELTKQEIMSQRAWRIHVTAIIFGLAHVNNSHSNYVSMFFQINWCYMGGVAYGYLS EKYQTLSVSILAHSINNILAISLMVYPKFKELTLLALVANNLAFCVLGTSSNNVIDETMVATKAYLSHLYQRCFVSLSNF SKKSFSQTVEII >Mature_251_residues TRISENFHAWGAHLSPIAIQAKEIGLKAIVIIDPVVAEMVKIVAVKILLEEVTKALFSSKQLPGINVRLITVVGPVVEEV FFRGMLQRGIGITQAGWNRFVIKRELTKQEIMSQRAWRIHVTAIIFGLAHVNNSHSNYVSMFFQINWCYMGGVAYGYLSE KYQTLSVSILAHSINNILAISLMVYPKFKELTLLALVANNLAFCVLGTSSNNVIDETMVATKAYLSHLYQRCFVSLSNFS KKSFSQTVEII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28215; Mature: 28083
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRISENFHAWGAHLSPIAIQAKEIGLKAIVIIDPVVAEMVKIVAVKILLEEVTKALFSS CCCCCCCCHHCCCCCCCEEEEHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCC KQLPGINVRLITVVGPVVEEVFFRGMLQRGIGITQAGWNRFVIKRELTKQEIMSQRAWRI CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEE HVTAIIFGLAHVNNSHSNYVSMFFQINWCYMGGVAYGYLSEKYQTLSVSILAHSINNILA EHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHE ISLMVYPKFKELTLLALVANNLAFCVLGTSSNNVIDETMVATKAYLSHLYQRCFVSLSNF EEEEECCCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC SKKSFSQTVEII CHHHHHHHHCCC >Mature Secondary Structure TRISENFHAWGAHLSPIAIQAKEIGLKAIVIIDPVVAEMVKIVAVKILLEEVTKALFSS CCCCCCCHHCCCCCCCEEEEHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCC KQLPGINVRLITVVGPVVEEVFFRGMLQRGIGITQAGWNRFVIKRELTKQEIMSQRAWRI CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEE HVTAIIFGLAHVNNSHSNYVSMFFQINWCYMGGVAYGYLSEKYQTLSVSILAHSINNILA EHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHE ISLMVYPKFKELTLLALVANNLAFCVLGTSSNNVIDETMVATKAYLSHLYQRCFVSLSNF EEEEECCCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC SKKSFSQTVEII CHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA