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The map label for this gene is rpmC

Identifier: 46446054

GI number: 46446054

Start: 553280

End: 553501

Strand: Direct

Name: rpmC

Synonym: pc0420

Alternate gene names: 46446054

Gene position: 553280-553501 (Clockwise)

Preceding gene: 46446053

Following gene: 46446055

Centisome position: 22.92

GC content: 37.84

Gene sequence:

>222_bases
ATGTATAAAGCGAAAGATTTAAGAGATCAAAGTTTAGAAGAACTCGAAGCAACCCACGACGAGTCTCGCAGAAAATTGTT
TGAACTCAACAACGAGTTTCGCTCTCAAAAAAAGAGAGAAAAACCACATGAGATGAAACATACTCGCAAAGATATCGCTC
GCTTGTTAACAGTGATTACAGAGAAGCGTCGCGAAAATCAAAATCAGACTAATCAAGGATAA

Upstream 100 bases:

>100_bases
TGTGCCCAAAGATATGGCTCAAAGTGCTTTACGCAGAGCAGCGGCTAAATTGGGATTAAAAACACGATTTGTTGAACGCG
TAGAACAAGTTTGAGGTTAT

Downstream 100 bases:

>100_bases
TCATGCAACAAGAAGAAAGAGGAAGCCGTAAAGTTAAAAAAGGCATCGTCGTCTCTAATAAAATGCAAAAAACCGTTGTT
GTGAAAGTTGAGCGTACTTT

Product: putative 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MYKAKDLRDQSLEELEATHDESRRKLFELNNEFRSQKKREKPHEMKHTRKDIARLLTVITEKRRENQNQTNQG

Sequences:

>Translated_73_residues
MYKAKDLRDQSLEELEATHDESRRKLFELNNEFRSQKKREKPHEMKHTRKDIARLLTVITEKRRENQNQTNQG
>Mature_73_residues
MYKAKDLRDQSLEELEATHDESRRKLFELNNEFRSQKKREKPHEMKHTRKDIARLLTVITEKRRENQNQTNQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_PARUW (Q6ME55)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_007419.1
- ProteinModelPortal:   Q6ME55
- SMR:   Q6ME55
- STRING:   Q6ME55
- GeneID:   2780821
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc0420
- NMPDR:   fig|264201.1.peg.420
- HOGENOM:   HBG730819
- ProtClustDB:   CLSK2762168
- BioCyc:   CPRO264201:PC0420-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- InterPro:   IPR018254
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 8923; Mature: 8923

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKAKDLRDQSLEELEATHDESRRKLFELNNEFRSQKKREKPHEMKHTRKDIARLLTVIT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EKRRENQNQTNQG
HHHHHCCCCCCCC
>Mature Secondary Structure
MYKAKDLRDQSLEELEATHDESRRKLFELNNEFRSQKKREKPHEMKHTRKDIARLLTVIT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EKRRENQNQTNQG
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA