Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446043
Identifier: 46446043
GI number: 46446043
Start: 545325
End: 546221
Strand: Direct
Name: 46446043
Synonym: pc0409
Alternate gene names: NA
Gene position: 545325-546221 (Clockwise)
Preceding gene: 46446042
Following gene: 46446044
Centisome position: 22.59
GC content: 35.79
Gene sequence:
>897_bases ATGAATGCCATCACTTCCCATATCTCTCATGGGGTTAACTCCGCTCTTTTCACTATTGGTGAGGGAGTTAGTCTAGTTTC CAGTGAAGTTAAAAAAGGAATTAGGTACGTAGGAGAAGGTCCGAGCAGAGCTGCTTACGATATTTATGATTTACGTCACG AAGGGTTTGAAAAATGGACAAAAGCTGCAATTGCCAATTTAAAATTAATTGGGCGAATAAAGCATACAAACGTATTTAAT GCTGCCATTGAAACTTTAGAGGGTCAAAAAAACCTTTACTATGCAACAAAATTTATTGGATCAGCCTGTGACTTTATTCA ACGTGACAAGGTGACAAAAAAAGTTAGTTTGACAATTCCAAAATATAAAGAAGGAACAAATTGGGTCGCGGTTCTCTATG GAATAGGCAATTTTTTAGATACTGCAAGATTTTTGCAAAAACATGAAGTTGTTGCGTTTCAAACTGTTTCTAGATTAGGT GCTGCAATTGGTTCTATTAAAATATCTTACTTAAAAGGTAAACGTTTAGAACAAATTTCCTTAGATCAAATTCCCGTGCT TAGCAATGTTTTTTATTCGCCAAAAGATATATTTATTTTTGCTGCCTCAGGAATCGAGATTTCGCGCTTTGTCAAAGCGT TCGTTAATGTTGAAGGAGAGACAGGGGAAGATCGTACAAGAAAGAGAAAAGAAATTTTATCGGATATAAGTACGTGGCTT AAATTGACTGGTAGCATTGGTAAAATGATCTTAATTGGTTGTGGAAGTCGCTATGGAACTGCATTTTGGTTCACATTAGT GGATGTAATTACACAAAATGCTGGTTTAATTAGATATTGGAAAGATCGTTCTAGAGATAGAGAGGTTCGCTTTAATAATC CAGCAATAGCAGCGTAA
Upstream 100 bases:
>100_bases GGTATTGCCTGCGTCCTTGCAAGACCAAAACCAAATTATTTTGAAACAATGACTGCTTAGGCGGTTAATCATCAGAAATA TAACGATATAAGGATTTAAT
Downstream 100 bases:
>100_bases ATTGCTTTTATTTACACTCAGAATAAGGTACTTATTCTGAGTGATTATTCGTAAATATTCTTACGTCGTTCATACAAGGC AGAAAATGGGAGTTTGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MNAITSHISHGVNSALFTIGEGVSLVSSEVKKGIRYVGEGPSRAAYDIYDLRHEGFEKWTKAAIANLKLIGRIKHTNVFN AAIETLEGQKNLYYATKFIGSACDFIQRDKVTKKVSLTIPKYKEGTNWVAVLYGIGNFLDTARFLQKHEVVAFQTVSRLG AAIGSIKISYLKGKRLEQISLDQIPVLSNVFYSPKDIFIFAASGIEISRFVKAFVNVEGETGEDRTRKRKEILSDISTWL KLTGSIGKMILIGCGSRYGTAFWFTLVDVITQNAGLIRYWKDRSRDREVRFNNPAIAA
Sequences:
>Translated_298_residues MNAITSHISHGVNSALFTIGEGVSLVSSEVKKGIRYVGEGPSRAAYDIYDLRHEGFEKWTKAAIANLKLIGRIKHTNVFN AAIETLEGQKNLYYATKFIGSACDFIQRDKVTKKVSLTIPKYKEGTNWVAVLYGIGNFLDTARFLQKHEVVAFQTVSRLG AAIGSIKISYLKGKRLEQISLDQIPVLSNVFYSPKDIFIFAASGIEISRFVKAFVNVEGETGEDRTRKRKEILSDISTWL KLTGSIGKMILIGCGSRYGTAFWFTLVDVITQNAGLIRYWKDRSRDREVRFNNPAIAA >Mature_298_residues MNAITSHISHGVNSALFTIGEGVSLVSSEVKKGIRYVGEGPSRAAYDIYDLRHEGFEKWTKAAIANLKLIGRIKHTNVFN AAIETLEGQKNLYYATKFIGSACDFIQRDKVTKKVSLTIPKYKEGTNWVAVLYGIGNFLDTARFLQKHEVVAFQTVSRLG AAIGSIKISYLKGKRLEQISLDQIPVLSNVFYSPKDIFIFAASGIEISRFVKAFVNVEGETGEDRTRKRKEILSDISTWL KLTGSIGKMILIGCGSRYGTAFWFTLVDVITQNAGLIRYWKDRSRDREVRFNNPAIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33288; Mature: 33288
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAITSHISHGVNSALFTIGEGVSLVSSEVKKGIRYVGEGPSRAAYDIYDLRHEGFEKWT CCHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KAAIANLKLIGRIKHTNVFNAAIETLEGQKNLYYATKFIGSACDFIQRDKVTKKVSLTIP HHHHHHHHHEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC KYKEGTNWVAVLYGIGNFLDTARFLQKHEVVAFQTVSRLGAAIGSIKISYLKGKRLEQIS CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCC LDQIPVLSNVFYSPKDIFIFAASGIEISRFVKAFVNVEGETGEDRTRKRKEILSDISTWL CCCCCHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH KLTGSIGKMILIGCGSRYGTAFWFTLVDVITQNAGLIRYWKDRSRDREVRFNNPAIAA HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCEEECCCCCCC >Mature Secondary Structure MNAITSHISHGVNSALFTIGEGVSLVSSEVKKGIRYVGEGPSRAAYDIYDLRHEGFEKWT CCHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KAAIANLKLIGRIKHTNVFNAAIETLEGQKNLYYATKFIGSACDFIQRDKVTKKVSLTIP HHHHHHHHHEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC KYKEGTNWVAVLYGIGNFLDTARFLQKHEVVAFQTVSRLGAAIGSIKISYLKGKRLEQIS CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCC LDQIPVLSNVFYSPKDIFIFAASGIEISRFVKAFVNVEGETGEDRTRKRKEILSDISTWL CCCCCHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH KLTGSIGKMILIGCGSRYGTAFWFTLVDVITQNAGLIRYWKDRSRDREVRFNNPAIAA HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA