Definition Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence.
Accession NC_005823
Length 4,277,185

Click here to switch to the map view.

The map label for this gene is 45659282

Identifier: 45659282

GI number: 45659282

Start: 4240294

End: 4240503

Strand: Reverse

Name: 45659282

Synonym: LIC13466

Alternate gene names: NA

Gene position: 4240503-4240294 (Counterclockwise)

Preceding gene: 45659284

Following gene: 45659281

Centisome position: 99.14

GC content: 39.05

Gene sequence:

>210_bases
TTGAATGTGGAAACTCCCGCAGATCACAATCTTACGAACAATTCTAAAATTATAAGAACTCATACTTTTAGAAAATTTTT
TCTCGTTTTCTTATGCCGAACTTGCGTTCGGGTGGTAAATAGTAATTTTAAGGTTTTATTATATACGGAGGAGAATTTTG
CGGGCAGAGGGACTCGCCCTCTCCGTAGTCTCGCATCCTTGCTCGACTAA

Upstream 100 bases:

>100_bases
AGGGGCGCCATTTTGTCTAAGTAGTTCTTTCTTATTTAAGGTGAGTTCGACGTAAGGAATTTATGGCTTATTTTTCTAAA
AAAATTGTGATCTCGATTCC

Downstream 100 bases:

>100_bases
CTTCGAGGCACTTCGCTTTGTCCTCAGCACTTCGTGTGCTTCGGTCGCATTTGTGACGCTCCTATTGTCGCTACAAATGC
TTTCCAAAGCTCCGCGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 69

Protein sequence:

>69_residues
MNVETPADHNLTNNSKIIRTHTFRKFFLVFLCRTCVRVVNSNFKVLLYTEENFAGRGTRPLRSLASLLD

Sequences:

>Translated_69_residues
MNVETPADHNLTNNSKIIRTHTFRKFFLVFLCRTCVRVVNSNFKVLLYTEENFAGRGTRPLRSLASLLD
>Mature_69_residues
MNVETPADHNLTNNSKIIRTHTFRKFFLVFLCRTCVRVVNSNFKVLLYTEENFAGRGTRPLRSLASLLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7987; Mature: 7987

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVETPADHNLTNNSKIIRTHTFRKFFLVFLCRTCVRVVNSNFKVLLYTEENFAGRGTRP
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHH
LRSLASLLD
HHHHHHHHC
>Mature Secondary Structure
MNVETPADHNLTNNSKIIRTHTFRKFFLVFLCRTCVRVVNSNFKVLLYTEENFAGRGTRP
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHH
LRSLASLLD
HHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA