Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is 45659276
Identifier: 45659276
GI number: 45659276
Start: 4236084
End: 4236416
Strand: Reverse
Name: 45659276
Synonym: LIC13459
Alternate gene names: NA
Gene position: 4236416-4236084 (Counterclockwise)
Preceding gene: 45659280
Following gene: 45659273
Centisome position: 99.05
GC content: 30.03
Gene sequence:
>333_bases GTGATGCAAACTGAAGATAAAAAATACATTCGTGTTTGGAAAAAGTTAAACGTCTCCGAAATTTCTTCCCAATTATTGCT GATAGATGATTTGTATGGAACTTGTGGAAATTGTAAACATCTTGGCCTAAATTATACGAAAGATAAAACTTGTCCCGAAT GTAAGACTAAATTTCGTTATTTGGCAACGAATTCAAAATCCCAAACCGAAATTGCTAAAATTCTAATTCGTCTCGAAAAA GAAAATCTAGATTTAATATTAATTGATCGAGATGATTTTAATCAATCTAAAGCAAAAGACGCCATAAAAGATTTATTTAA ACCGACAGAATAA
Upstream 100 bases:
>100_bases TCGTAAAAATCTGAATCGATCAATTGGCAGATTTACAATATTATCGATTTAACCTTCGGTTTTGTCTTGACTCAGAAAAA GTTTAATTTATCCAAAGGAA
Downstream 100 bases:
>100_bases AATATTCGAAATCGGATTTTAGATTTGGAAAGCCCTAAAAAATCTTTATTCAATCATATTTTACGTAAAATCGCCGTTAT GCGACCATGCAAAAATACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MMQTEDKKYIRVWKKLNVSEISSQLLLIDDLYGTCGNCKHLGLNYTKDKTCPECKTKFRYLATNSKSQTEIAKILIRLEK ENLDLILIDRDDFNQSKAKDAIKDLFKPTE
Sequences:
>Translated_110_residues MMQTEDKKYIRVWKKLNVSEISSQLLLIDDLYGTCGNCKHLGLNYTKDKTCPECKTKFRYLATNSKSQTEIAKILIRLEK ENLDLILIDRDDFNQSKAKDAIKDLFKPTE >Mature_110_residues MMQTEDKKYIRVWKKLNVSEISSQLLLIDDLYGTCGNCKHLGLNYTKDKTCPECKTKFRYLATNSKSQTEIAKILIRLEK ENLDLILIDRDDFNQSKAKDAIKDLFKPTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12820; Mature: 12820
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQTEDKKYIRVWKKLNVSEISSQLLLIDDLYGTCGNCKHLGLNYTKDKTCPECKTKFRY CCCCCHHHHHHHHHHCCHHHHHCCEEEEECCCCCCCCCEECCCCCCCCCCCHHHHHHHHH LATNSKSQTEIAKILIRLEKENLDLILIDRDDFNQSKAKDAIKDLFKPTE EECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MMQTEDKKYIRVWKKLNVSEISSQLLLIDDLYGTCGNCKHLGLNYTKDKTCPECKTKFRY CCCCCHHHHHHHHHHCCHHHHHCCEEEEECCCCCCCCCEECCCCCCCCCCCHHHHHHHHH LATNSKSQTEIAKILIRLEKENLDLILIDRDDFNQSKAKDAIKDLFKPTE EECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA