Click here to switch to the map view.

The map label for this gene is 45659179

Identifier: 45659179

GI number: 45659179

Start: 4118270

End: 4120105

Strand: Reverse

Name: 45659179

Synonym: LIC13360

Alternate gene names: NA

Gene position: 4120105-4118270 (Counterclockwise)

Preceding gene: 45659180

Following gene: 45659172

Centisome position: 96.33

GC content: 33.77

Gene sequence:

>1836_bases
ATGAAAAATTTAAAATATAAAACATTTGTTTTTAAATTAAATTTTTACTTACAACATATCTCAAAACTAAATTTCACTTT
ATCAAAGAAGTTAAATTGGATAATTCAATGCCTCACTTTTATAGACGTTCGACAAGTTCTAACCCTACCACAACTACTTA
AAACGCAATCTGTAAAAAACGTTTTAGCGAATTCAAGAAGTTGTAACATTGGATTTTTTCGAGACAGATTTTTATTTTCT
TTATTTTTGATTTTTATAAATTTTTCCTTAGATGCAAAAGAGGTAGAATTAAAAATTCAAGACGTAACCTTATACGAGTC
TTCAGCTGGAATTTTAAGAAGTGGTAAAATAGATTTGGAGCCTGGAATGAACGAATTCATAATCAGGAACTTACCGATTA
CACTTCAGGATGAATCTTTGGTTGCTTCGGTGGAAGCTCTAGGAGCCTCCGTTGTTGGCTCTAGTACTTGGATAGAAACC
GGATCTATCATTCACAACGAAGAAGCTTTAGAGTTACAAAAAAAGATCCGTCTTTTAGAAAAGGAAATCGAAGTTTACGA
AAGTAATAATTCTAATTTTAAAAATTTGAAAAAGATACTTGTAGATACTAGATTAAAACTAACGGAAATGATTTCCAAAA
ACCTATTTTACAAAAAGAACGAAGCGGATTTTAAAAAATGGTTTCAAACTTTTTCCGGAAATCGACAAGCTATTCAAACT
CTATTGAGTTCTGATCAAGAAGTAATTCGTGCAATCAAAGATCTTAAGAAAAAACTTTCTGAATTGCAGGATAAAATGAA
CGTGATTCTTTCTTTATCCGAAAAATCTTCCAGGATTACTAAAATCCTCGTTAGTTTTACCGGGACCGAAAAAAAGGAAG
GAAGGCTCAATCTTACGTATCAGTCCGGAAAGGTTTCTTGGAAACCATTCTATTCGGTTAGTATGGATGGAAAAGAAAGG
ATTGAATTTGAATATCTCGCTGAAATCAATCAGGAAAGCGGAGAGGATTGGAAGAATATTAATCTTTTATTATCTACTTC
CAGTCCAGACGTAAGCGGAAGAAGACCTCGCCTTTCCAGCCAAAGGTTATACGATCAAAAAAAACCAACTAACAAAGACG
GGATTGTAGCTGTTCAAAGTCAAAATTTAGCAGAAGAATCCAATGTAGCTCCGGAAGTAGAATCTCCTGAAGCCGAGATG
ACTGGACGTAGCGAAGAATCTGGAAGTGGTTTTTTATTTCGTTATTCTAAACCGGTTACTCTTTTTTCAAGAAAAGAGTC
TAAAAAAATATCTTTAGCTTCATTTGTGACGGAGGCGGCATTTACAACCTTATATGTACCTTCTTTAAAACGTTATCCGC
TTATTAAAGGAATTTTTAAAAACGTATCTGGATTTCCTATTCTTCCCGGAGAAGTTGTTGTATTTCGCCAAGCTGGTATG
GTGGGAGCGTCTAACTTCGGTTATATTAGTCCCGGAGAAAAGGCTGAAATTTCATTCGGTTCTGAAAACGAAATTAGAGC
GATCTATAGAAAAGAATCCAATCAAACCAAAGAAGGAATTCTTTCTGGTACTAAGATAATTGAAAAATCAATTCGAGTGG
AGTTAGAAAATTTTGGAAAAGAATCTAGAAAGATTTCGTTTCAAGAAGCAATTCCAGTTTCTGGAGTAGAAAGTGTAAAG
GTTTTCATCGATTCTAATACCACGCCGGGACATTCGGAGCTAAGAAAAGACTCCGGAATTTTAGAATGGAAATTAGATTT
AAAACCGAATCAAAAACAAGAAATTAAACTTAAGTACAAAGTAAGTTTTCCAGCGGAATTTGACTTGAATATGTGA

Upstream 100 bases:

>100_bases
CTTCCTTCTGGAGGAAAGAAAGTTATAGAATTTGAATATTCTGTAAGCCATCCTTCGGAAAATAGACTTATTAGAACTCC
TGGCTCCGGAGGATATTAAA

Downstream 100 bases:

>100_bases
CGTCTAACGTATATCTTCTTCTCTTGAAATTCCAATAGGAGAAGGAATTTCCGTCATATCCCAAAGTTCTAAAACTCCGA
TAAGAGAGTTTTGTTTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MKNLKYKTFVFKLNFYLQHISKLNFTLSKKLNWIIQCLTFIDVRQVLTLPQLLKTQSVKNVLANSRSCNIGFFRDRFLFS
LFLIFINFSLDAKEVELKIQDVTLYESSAGILRSGKIDLEPGMNEFIIRNLPITLQDESLVASVEALGASVVGSSTWIET
GSIIHNEEALELQKKIRLLEKEIEVYESNNSNFKNLKKILVDTRLKLTEMISKNLFYKKNEADFKKWFQTFSGNRQAIQT
LLSSDQEVIRAIKDLKKKLSELQDKMNVILSLSEKSSRITKILVSFTGTEKKEGRLNLTYQSGKVSWKPFYSVSMDGKER
IEFEYLAEINQESGEDWKNINLLLSTSSPDVSGRRPRLSSQRLYDQKKPTNKDGIVAVQSQNLAEESNVAPEVESPEAEM
TGRSEESGSGFLFRYSKPVTLFSRKESKKISLASFVTEAAFTTLYVPSLKRYPLIKGIFKNVSGFPILPGEVVVFRQAGM
VGASNFGYISPGEKAEISFGSENEIRAIYRKESNQTKEGILSGTKIIEKSIRVELENFGKESRKISFQEAIPVSGVESVK
VFIDSNTTPGHSELRKDSGILEWKLDLKPNQKQEIKLKYKVSFPAEFDLNM

Sequences:

>Translated_611_residues
MKNLKYKTFVFKLNFYLQHISKLNFTLSKKLNWIIQCLTFIDVRQVLTLPQLLKTQSVKNVLANSRSCNIGFFRDRFLFS
LFLIFINFSLDAKEVELKIQDVTLYESSAGILRSGKIDLEPGMNEFIIRNLPITLQDESLVASVEALGASVVGSSTWIET
GSIIHNEEALELQKKIRLLEKEIEVYESNNSNFKNLKKILVDTRLKLTEMISKNLFYKKNEADFKKWFQTFSGNRQAIQT
LLSSDQEVIRAIKDLKKKLSELQDKMNVILSLSEKSSRITKILVSFTGTEKKEGRLNLTYQSGKVSWKPFYSVSMDGKER
IEFEYLAEINQESGEDWKNINLLLSTSSPDVSGRRPRLSSQRLYDQKKPTNKDGIVAVQSQNLAEESNVAPEVESPEAEM
TGRSEESGSGFLFRYSKPVTLFSRKESKKISLASFVTEAAFTTLYVPSLKRYPLIKGIFKNVSGFPILPGEVVVFRQAGM
VGASNFGYISPGEKAEISFGSENEIRAIYRKESNQTKEGILSGTKIIEKSIRVELENFGKESRKISFQEAIPVSGVESVK
VFIDSNTTPGHSELRKDSGILEWKLDLKPNQKQEIKLKYKVSFPAEFDLNM
>Mature_611_residues
MKNLKYKTFVFKLNFYLQHISKLNFTLSKKLNWIIQCLTFIDVRQVLTLPQLLKTQSVKNVLANSRSCNIGFFRDRFLFS
LFLIFINFSLDAKEVELKIQDVTLYESSAGILRSGKIDLEPGMNEFIIRNLPITLQDESLVASVEALGASVVGSSTWIET
GSIIHNEEALELQKKIRLLEKEIEVYESNNSNFKNLKKILVDTRLKLTEMISKNLFYKKNEADFKKWFQTFSGNRQAIQT
LLSSDQEVIRAIKDLKKKLSELQDKMNVILSLSEKSSRITKILVSFTGTEKKEGRLNLTYQSGKVSWKPFYSVSMDGKER
IEFEYLAEINQESGEDWKNINLLLSTSSPDVSGRRPRLSSQRLYDQKKPTNKDGIVAVQSQNLAEESNVAPEVESPEAEM
TGRSEESGSGFLFRYSKPVTLFSRKESKKISLASFVTEAAFTTLYVPSLKRYPLIKGIFKNVSGFPILPGEVVVFRQAGM
VGASNFGYISPGEKAEISFGSENEIRAIYRKESNQTKEGILSGTKIIEKSIRVELENFGKESRKISFQEAIPVSGVESVK
VFIDSNTTPGHSELRKDSGILEWKLDLKPNQKQEIKLKYKVSFPAEFDLNM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17566996, Length=578, Percent_Identity=21.7993079584775, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71988071, Length=557, Percent_Identity=23.6983842010772, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI115534513, Length=363, Percent_Identity=24.2424242424242, Blast_Score=97, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17566994, Length=517, Percent_Identity=22.4371373307544, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17566992, Length=346, Percent_Identity=23.121387283237, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI71988077, Length=312, Percent_Identity=24.0384615384615, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69455; Mature: 69455

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLKYKTFVFKLNFYLQHISKLNFTLSKKLNWIIQCLTFIDVRQVLTLPQLLKTQSVKN
CCCCCEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLANSRSCNIGFFRDRFLFSLFLIFINFSLDAKEVELKIQDVTLYESSAGILRSGKIDLE
HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCEECCCEECC
PGMNEFIIRNLPITLQDESLVASVEALGASVVGSSTWIETGSIIHNEEALELQKKIRLLE
CCCCHHHHCCCCEEEECCHHHHHHHHHCHHHCCCCCEEECCCEEECHHHHHHHHHHHHHH
KEIEVYESNNSNFKNLKKILVDTRLKLTEMISKNLFYKKNEADFKKWFQTFSGNRQAIQT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHH
LLSSDQEVIRAIKDLKKKLSELQDKMNVILSLSEKSSRITKILVSFTGTEKKEGRLNLTY
HHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHEEEEEEECCCCCCCCEEEEEE
QSGKVSWKPFYSVSMDGKERIEFEYLAEINQESGEDWKNINLLLSTSSPDVSGRRPRLSS
ECCCEEECEEEEEECCCHHHCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCH
QRLYDQKKPTNKDGIVAVQSQNLAEESNVAPEVESPEAEMTGRSEESGSGFLFRYSKPVT
HHHHHCCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCCEE
LFSRKESKKISLASFVTEAAFTTLYVPSLKRYPLIKGIFKNVSGFPILPGEVVVFRQAGM
EEECCCCCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCC
VGASNFGYISPGEKAEISFGSENEIRAIYRKESNQTKEGILSGTKIIEKSIRVELENFGK
CCCCCCCCCCCCCCCEEECCCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ESRKISFQEAIPVSGVESVKVFIDSNTTPGHSELRKDSGILEWKLDLKPNQKQEIKLKYK
HHHEEEHHHCCCCCCCCEEEEEEECCCCCCHHHHHHCCCEEEEEECCCCCCCCEEEEEEE
VSFPAEFDLNM
EECCCCCCCCC
>Mature Secondary Structure
MKNLKYKTFVFKLNFYLQHISKLNFTLSKKLNWIIQCLTFIDVRQVLTLPQLLKTQSVKN
CCCCCEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLANSRSCNIGFFRDRFLFSLFLIFINFSLDAKEVELKIQDVTLYESSAGILRSGKIDLE
HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCEECCCEECC
PGMNEFIIRNLPITLQDESLVASVEALGASVVGSSTWIETGSIIHNEEALELQKKIRLLE
CCCCHHHHCCCCEEEECCHHHHHHHHHCHHHCCCCCEEECCCEEECHHHHHHHHHHHHHH
KEIEVYESNNSNFKNLKKILVDTRLKLTEMISKNLFYKKNEADFKKWFQTFSGNRQAIQT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHH
LLSSDQEVIRAIKDLKKKLSELQDKMNVILSLSEKSSRITKILVSFTGTEKKEGRLNLTY
HHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHEEEEEEECCCCCCCCEEEEEE
QSGKVSWKPFYSVSMDGKERIEFEYLAEINQESGEDWKNINLLLSTSSPDVSGRRPRLSS
ECCCEEECEEEEEECCCHHHCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCH
QRLYDQKKPTNKDGIVAVQSQNLAEESNVAPEVESPEAEMTGRSEESGSGFLFRYSKPVT
HHHHHCCCCCCCCCEEEEECCCCCHHCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCCEE
LFSRKESKKISLASFVTEAAFTTLYVPSLKRYPLIKGIFKNVSGFPILPGEVVVFRQAGM
EEECCCCCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCC
VGASNFGYISPGEKAEISFGSENEIRAIYRKESNQTKEGILSGTKIIEKSIRVELENFGK
CCCCCCCCCCCCCCCEEECCCCCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ESRKISFQEAIPVSGVESVKVFIDSNTTPGHSELRKDSGILEWKLDLKPNQKQEIKLKYK
HHHEEEHHHCCCCCCCCEEEEEEECCCCCCHHHHHHCCCEEEEEECCCCCCCCEEEEEEE
VSFPAEFDLNM
EECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA