Click here to switch to the map view.

The map label for this gene is 45659161

Identifier: 45659161

GI number: 45659161

Start: 4098497

End: 4099024

Strand: Reverse

Name: 45659161

Synonym: LIC13342

Alternate gene names: NA

Gene position: 4099024-4098497 (Counterclockwise)

Preceding gene: 45659162

Following gene: 45659160

Centisome position: 95.83

GC content: 38.45

Gene sequence:

>528_bases
ATGGATATTCTTTTATTCGATGAAGGTCAAAAAATTGAATCTGTTTTGATAGAAGGTGTTGTTGGAACCGATTCTCTTTT
GGTTCCGGAAGTTTATTGGAATCGGTTGGATTTTCAAGAAAGGAAGGTTCTTCGGAATAGGCTTCCTTTTTTACTGAGAA
AATATTCGAAACAAATTGCGTCTATGACGCGACTTCATAATAAGGCGGGTAAAATTAAATACAATCTGGGTGTTGGTAAA
ATGAAAAAATTCAGTATTCGGGTTCATACCGGTGTTTGGGCGACCTTAGGTGTGTTAGCTGCTGCTCATGGGGTTTCTCG
GTGTTATCTTTTTAATTATATGCTCTGGCTGGATGAACAAGGGGATTTTTTTGTGAAAACTTTGAACCGGGGAGTTCCTC
GCTTTCACTGGACTTACGAAATGACTTGGAAGATCAACAGGAGACAAAATCTCATATCAAGAGAATTAAAGTTCGAACCA
AACCCAATGACGGACAAATATCCCTATTACTTACAGGAGTCTTCGTAA

Upstream 100 bases:

>100_bases
ACTGATATAGAACTCATTTTTCAAAAACTCTATTATGTTTTCTTTCTAATTTTTTTTATAAACCGTTCTGTTTAGATAAG
TAGAAGAACCGTTTCCTAGT

Downstream 100 bases:

>100_bases
TCAATTCATTGCGAGGGGGTAAAATAACTGAGTCCATATTTAAAAGAATTACGATATAATGAATTGCATTTCTAAAGAAT
ATGATTAACAATTCCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MDILLFDEGQKIESVLIEGVVGTDSLLVPEVYWNRLDFQERKVLRNRLPFLLRKYSKQIASMTRLHNKAGKIKYNLGVGK
MKKFSIRVHTGVWATLGVLAAAHGVSRCYLFNYMLWLDEQGDFFVKTLNRGVPRFHWTYEMTWKINRRQNLISRELKFEP
NPMTDKYPYYLQESS

Sequences:

>Translated_175_residues
MDILLFDEGQKIESVLIEGVVGTDSLLVPEVYWNRLDFQERKVLRNRLPFLLRKYSKQIASMTRLHNKAGKIKYNLGVGK
MKKFSIRVHTGVWATLGVLAAAHGVSRCYLFNYMLWLDEQGDFFVKTLNRGVPRFHWTYEMTWKINRRQNLISRELKFEP
NPMTDKYPYYLQESS
>Mature_175_residues
MDILLFDEGQKIESVLIEGVVGTDSLLVPEVYWNRLDFQERKVLRNRLPFLLRKYSKQIASMTRLHNKAGKIKYNLGVGK
MKKFSIRVHTGVWATLGVLAAAHGVSRCYLFNYMLWLDEQGDFFVKTLNRGVPRFHWTYEMTWKINRRQNLISRELKFEP
NPMTDKYPYYLQESS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20698; Mature: 20698

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILLFDEGQKIESVLIEGVVGTDSLLVPEVYWNRLDFQERKVLRNRLPFLLRKYSKQIA
CEEEEECCCCHHHHHHHHCCCCCCCEECHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SMTRLHNKAGKIKYNLGVGKMKKFSIRVHTGVWATLGVLAAAHGVSRCYLFNYMLWLDEQ
HHHHHHHCCCCEEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEECCC
GDFFVKTLNRGVPRFHWTYEMTWKINRRQNLISRELKFEPNPMTDKYPYYLQESS
CCEEHHHHHCCCCCEEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MDILLFDEGQKIESVLIEGVVGTDSLLVPEVYWNRLDFQERKVLRNRLPFLLRKYSKQIA
CEEEEECCCCHHHHHHHHCCCCCCCEECHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SMTRLHNKAGKIKYNLGVGKMKKFSIRVHTGVWATLGVLAAAHGVSRCYLFNYMLWLDEQ
HHHHHHHCCCCEEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEECCC
GDFFVKTLNRGVPRFHWTYEMTWKINRRQNLISRELKFEPNPMTDKYPYYLQESS
CCEEHHHHHCCCCCEEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA